Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04008 ATGCAAATCTCACTATCTACTATACTCGCCATCTTCTCCATCACACTAGTAATTCTCACTTCACCATCCACCTCTCTCTACTATTCTCCTTCACCTCCGGCGGCGCCGTTTAACTCTTCTTCCCATTCTTCTCACTTTTCTCCTCCTTATGCGGAATGGCTGTCCGCACACGCCACCTACTACACCCCCGCCAATTCCACCGACGCGCTTGGAGGCGCCTGCGGCTACTCTGACGGCACTGGTGCGGCGGCCGCGGCGATCCTCAGCCACGCGGTGTTTGAGCAGGGGCAGATCTGTGGTGCGTGCTTCGAGCTGCGGTGTGCCGAGGAGGATTCTCCGTTCGACCGTCGGTGGTGCATCCCCGGAAGGTCGGTGATGGTAACGGCGACGGACTTCTGTGCACCTAATTACGGGGTCGACGCCGACGAGGAGAGTGGCGGCGGGAGGATAAAGTGCAGAAGGGAAGGAGGAATCCGATTCACGATCGCTGGTTCTGGGATCTTCATTTCTGTGCTGATCAGCAATGTGGCTGGGACAGGAGACATTGTTGCCGTGAAGGTTAAGGGTTCAAGAACTGGCTGGCTTCCTATGGGGAGGAACTGGGGCCAAAACTGGCATGTAAGCGCCTTACTACAGAACCAACCTCTTTCTTTCGAGGCAAGCAATTTGAGTCTTGAACAACAAAACTTGTTTCAAGGAGTATGGTGCCCTCAAGGAGTTATGCTTGCTAGTTACCAAAAGGTTCCAGTGTTCTTGCATGATGGCAAGCCTTTGCTAGAGTCTTCCATCATTGTCAGCTACCTTGATGAGGTTTTTCCTTCCAATCCACTACTTCCAACTTGTGCCTATGAACGTGCCCAAGCAAGATTCTGGACTGACTTCATTGACAAAAAGGTGTTTGAGACCATGAGGGGTATCTGGCTAAGCAAGGGAGGAGAAGAACAAGAAGTTGCGAAGAAGGATTTCATTGAGATCCTAAAGCAACTAGAGGAAGCTCTTGGGGAGAAGGACTTCTTTGGTGGTGATTCCTTTGGGTATGTTGATGTGATTGCAATCCCTCTCACAACATGGTTCTTGGCATGTGAAAAATTTGGTGGCTTCAAAGTTGAAGACCACTGCCCCAAGATTACAGCATGGATTAAGAGGTGCTTTCAGAGGCCAACTGTGGTCAAATCACTCCCACACCCAGAAAATGTCTACCAGTTTACGACACAGTTTAGGCAGATGCATGGCCTTTGA 1239 0.5077 MQISLSTILAIFSITLVILTSPSTSLYYSPSPPAAPFNSSSHSSHFSPPYAEWLSAHATYYTPANSTDALGGACGYSDGTGAAAAAILSHAVFEQGQICGACFELRCAEEDSPFDRRWCIPGRSVMVTATDFCAPNYGVDADEESGGGRIKCRREGGIRFTIAGSGIFISVLISNVAGTGDIVAVKVKGSRTGWLPMGRNWGQNWHVSALLQNQPLSFEASNLSLEQQNLFQGVWCPQGVMLASYQKVPVFLHDGKPLLESSIIVSYLDEVFPSNPLLPTCAYERAQARFWTDFIDKKVFETMRGIWLSKGGEEQEVAKKDFIEILKQLEEALGEKDFFGGDSFGYVDVIAIPLTTWFLACEKFGGFKVEDHCPKITAWIKRCFQRPTVVKSLPHPENVYQFTTQFRQMHGL 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04008 412 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 245 405 - -
Aip03g04008 412 Gene3D Glutaredoxin 242 280 - -
Aip03g04008 412 Gene3D - 37 157 IPR036908 -
Aip03g04008 412 Gene3D - 158 241 IPR036749 -
Aip03g04008 412 SUPERFAMILY Barwin-like endoglucanases 48 175 IPR036908 -
Aip03g04008 412 Pfam Lytic transglycolase 87 135 IPR009009 -
Aip03g04008 412 Pfam Expansin C-terminal domain 158 222 IPR007117 -
Aip03g04008 412 Gene3D - 281 412 - -
Aip03g04008 412 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 187 276 IPR004045 -
Aip03g04008 412 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 245 405 IPR045073 -
Aip03g04008 412 SUPERFAMILY GST C-terminal domain-like 270 410 IPR036282 -
Aip03g04008 412 SFLD Main (cytGST) 245 409 - -
Aip03g04008 412 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 281 402 IPR010987 -
Aip03g04008 412 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 71 147 IPR007112 -
Aip03g04008 412 SFLD Main.3: Omega- and Tau-like 245 409 IPR045073 -
Aip03g04008 412 CDD GST_C_Tau 282 406 IPR045074 GO:0004364|GO:0006749
Aip03g04008 412 SUPERFAMILY PHL pollen allergen 154 221 IPR036749 -
Aip03g04008 412 SUPERFAMILY Thioredoxin-like 238 285 IPR036249 -
Aip03g04008 412 SMART dpbb_1 85 187 IPR007112 -
Aip03g04008 412 Pfam Glutathione S-transferase, C-terminal domain 313 387 IPR004046 -
Aip03g04008 412 Pfam Glutathione S-transferase, N-terminal domain 206 270 IPR004045 -
Aip03g04008 412 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 167 260 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04008 Aip-Chr3 123459602 123464131 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04008 52 221 Expansin Gene Family AT3G03220 55.340 2.44e-68 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04008 K00799 - adu:107481013 385.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04008 03 123459602 123464131 Aip03g04008 03 123459602 123464131 ECH