Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03982 ATGAATCAAAAGCATAACATTCCCAAAATCAACGGTGATATAAGCAACTCTAATGAAAACAATAATAGCCTTGTGCAACATGAGACAGAGAAAGAGTATCTGATGCTTGGTTTACAAGTGTTATTGGGAGGTATAAAGGATGAGTTATCTGAAGTAAAGAAAGAAGCAATAATTGATCATCAGAATTTCATTAGGATGTTATACATTCTCAATGCTCGTGTTAGCGAAATTCGAGAGATTGTAACCAAATGTTGTGGCGAGAACAATGAGAGAGGTGGATTTGTTAAGGAAATGAAAGGGTTTGTAGAGGAATGTGAGGAGGAGCTTAAAGTTGTGAAAGATGAACACCTTAGGATCATGGAGCTTGTGAAGAAAACCAATGAGTATTATCTAGGAGATGGAGGAGGATCAAACCCCTTTGAACTGTTTCTTATTGTGAGAGATCTTGTGCATGAAGAACCCCCCTCGCTCATCATGGACGATCGCACAAGCAGCGGCCATGACTTCCACCTTGCGTTTGGCACTTCAGGGACGAATTTGTCCAGTTAA 549 0.3989 MNQKHNIPKINGDISNSNENNNSLVQHETEKEYLMLGLQVLLGGIKDELSEVKKEAIIDHQNFIRMLYILNARVSEIREIVTKCCGENNERGGFVKEMKGFVEECEEELKVVKDEHLRIMELVKKTNEYYLGDGGGSNPFELFLIVRDLVHEEPPSLIMDDRTSSGHDFHLAFGTSGTNLSS 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03982 182 PANTHER FORMIN-LIKE PROTEIN 2 150 - -
Aip03g03982 182 SUPERFAMILY Formin homology 2 domain (FH2 domain) 43 150 - -
Aip03g03982 182 Coils Coil 95 115 - -
Aip03g03982 182 MobiDBLite consensus disorder prediction 1 20 - -
Aip03g03982 182 Pfam Formin Homology 2 Domain 43 150 IPR015425 -
Aip03g03982 182 Gene3D Formin, FH2 domain 19 152 IPR042201 -
Aip03g03982 182 PANTHER FORMIN-RELATED 2 150 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03982 Aip-Chr3 123130929 123131477 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03982 15 150 FH2 protein (formin) Gene Family AT1G70140 41.844 1.17e-26 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03982 - - aip:107618940 274.248