Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03944 ATGGGTTTCTCCCAAGGAACCTGCACTGATTCCAGTGACATTTCCATTGCCCCAAATGTTCCTCTTCCTCCTCCTTCCTCTTCCTCCTCCTCTCTACTTGCACATCACTACTGTGACCACAACAACCTCAAATTCAGAACCTTCCTCGGAAAAATGATTTGGGATTTTGGTTTTGCATGTCTTTCCAGCCCTTCTTCTCCTCCTCCTTCTTCTTCTTCTTCGAGTAGGAGGAGGAATAGCTGCAAAGATGATGAATGCAGCAACAAGAAGGGTAATTTGGAGCACAACAAGGCTTGGCTTCTTGCTGAGTCTGGTGGCTGTGGAGCTGAACTGTTGAACAATGCAGAGCCTCAATCGGTTCACTCTTCTTTCAGGTTCAGCTTCTGTTCTCAGGTTGAGTTGGAGTCCCTCAACATGAGTTCTTCAAGTGCTGCAACGGTTCTCATGGTGAATTTGGACAATGGTGTCAGTGAATCACGCGCCAGAGAGATCAAGTGGAGGAGGATTGAGTCTTTGGAGAAGAGCATTTCCCCAGTTGCACACTCTTTGATCAGATTCACCTATGCTGAAATACTCTCTGCTACCCGCAATTTCTCCAAAGGTAGAGTATTGGGGAGAGGGGCGTTGAGCTGTGTTTTCAGAGGGAGAGTTGGGATTTTGAGAACTGTGGTGGCTATAAAACGCTTGGACAAGGAAGATAAGGAGTCTGCAAAGGCATTTTGTAGAGAATTGATGATTGCAAGTTCCCTTCATAGCCCAAACGTCGTTCCCCTTGTTGGTTTTTGTATTGACCCGGAGGAGGGTTTGTTCTTGGTGTACAAGTATGTCTCAGGTGGCAGCTTGGAGCGGCACTTGCATGGGAGGAAGAAGGGTGGGAAGGGTAGTTCACCCCTTCCATGGTCTGTGAGGTACAAAGTTGCAATTGGGATTGCAGAGGCTGTGGCTTATCTGCATAATGGAACTGAAAGATGTGTTGTTCACAGAGACATTAAGCCCTCTAATATTCTGCTTTCTTCTAAGAAGACTCCCAAGTTATGTGATTTCGGGTTAGCTACTTGGACTACGGCGCCTTCAATTCCTTTCCTTTGCAAAACTGTCAAAGGAACATTTGGATATTTGGCTCCTGAGTATTTCCAACATGGGAAAGTATCAGATAAGACTGATGTTTATGCTTTTGGAGTTGTTCTATTGGAACTTATAACTGGTCGGAAACCAATTGAAGCAAAAAGGTCTCAGGGGGAGGAGAACTTGGTCCTTTGGGCTAAGCCTTTTCTACAGAAAGGGAAAGGAGCCATTGACGAGCTGCTTGATCCTCAACTCAAATGCAGTTTGAGATTCTCAAATCAAATCGCTCGGATGATCGAAGCAGCAGCCGCTTCTGTCACAAACGAGGAATCTCGGCGACCCGGCATACACGAGATTATCGCCATACTGAAAGGTGAAGAAGAACCTCTTTTCTCTAAAAGAAAGAAGTCTGGTTTTCTCGGGAATGGATGTGTGATTGATTGTTATTCTCAGCTAGAACAAACAAATAATGAGATGAAAAGTCACTTGGCTTTGGCAATGCTAGGAGTTTCTGAGTTTGAGGATGAGGATTATCTCTATGGTCGTTAA 1614 0.4517 MGFSQGTCTDSSDISIAPNVPLPPPSSSSSSLLAHHYCDHNNLKFRTFLGKMIWDFGFACLSSPSSPPPSSSSSSRRRNSCKDDECSNKKGNLEHNKAWLLAESGGCGAELLNNAEPQSVHSSFRFSFCSQVELESLNMSSSSAATVLMVNLDNGVSESRAREIKWRRIESLEKSISPVAHSLIRFTYAEILSATRNFSKGRVLGRGALSCVFRGRVGILRTVVAIKRLDKEDKESAKAFCRELMIASSLHSPNVVPLVGFCIDPEEGLFLVYKYVSGGSLERHLHGRKKGGKGSSPLPWSVRYKVAIGIAEAVAYLHNGTERCVVHRDIKPSNILLSSKKTPKLCDFGLATWTTAPSIPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELITGRKPIEAKRSQGEENLVLWAKPFLQKGKGAIDELLDPQLKCSLRFSNQIARMIEAAAASVTNEESRRPGIHEIIAILKGEEEPLFSKRKKSGFLGNGCVIDCYSQLEQTNNEMKSHLALAMLGVSEFEDEDYLYGR 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03944 537 SMART serkin_6 198 486 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g03944 537 ProSitePatterns Serine/Threonine protein kinases active-site signature. 325 337 IPR008271 GO:0004672|GO:0006468
Aip03g03944 537 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1 1 535 - -
Aip03g03944 537 MobiDBLite consensus disorder prediction 1 25 - -
Aip03g03944 537 PANTHER OS01G0750732 PROTEIN 1 535 - -
Aip03g03944 537 SUPERFAMILY Protein kinase-like (PK-like) 178 477 IPR011009 -
Aip03g03944 537 Gene3D Phosphorylase Kinase; domain 1 182 275 - -
Aip03g03944 537 Pfam Protein kinase domain 199 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g03944 537 MobiDBLite consensus disorder prediction 65 87 - -
Aip03g03944 537 MobiDBLite consensus disorder prediction 1 16 - -
Aip03g03944 537 Gene3D Transferase(Phosphotransferase) domain 1 276 492 - -
Aip03g03944 537 ProSiteProfiles Protein kinase domain profile. 198 486 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03944 Aip-Chr3 122474749 122477897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03944 186 515 Trihelix Transcription Factor Family AT1G70460 40.000 1.47e-68 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Aip03g03944 Pkinase 3.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03944 - - adu:107481060 1005.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03944 03 122474749 122477897 Aip03g03944 03 122474749 122477897 ECH