Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03932 ATGAAGTTCAGGTTCCTTATGTATAGAAATGCTGCTCAAGAAGTGAATGGCATCTGGTTCTATAATGCACATGAATGTGAAGAGGTTGCAAATATTTTTAACAGGATCCTTAATGCATATGCTAAGCTGCCTCCAAAGTCAAAGGTGTCTTTTACAAAGAGGTTTTCTCATTTTTGGATCCTCCCAATCTATGCAAAGCTGCGCCAGTGTTTGTACGCAGTGGAGCCCCCGATGAGCATAATCACGGTTAAAGAATGCACAAAAGCATTATATCTGAATCCAGTGTACATTAAAGCTTTAGTAAGAAGAGGAGAAGCTCATGAAAAGCTTGAACATTTTGAAGAAACCATTGCTGATATGAAAAAGATCTTAGAAATTGATCCTTCAAATGATCAATCTAGGAAAGCAATCAAACGAGTTGAGCCGCTTGCTGCAGAAAAGCGGGAAATGATGAAGAGATGA 462 0.3874 MKFRFLMYRNAAQEVNGIWFYNAHECEEVANIFNRILNAYAKLPPKSKVSFTKRFSHFWILPIYAKLRQCLYAVEPPMSIITVKECTKALYLNPVYIKALVRRGEAHEKLEHFEETIADMKKILEIDPSNDQSRKAIKRVEPLAAEKREMMKR 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03932 153 Pfam Dcp1-like decapping family 4 34 IPR010334 GO:0000290|GO:0008047|GO:0043085
Aip03g03932 153 PANTHER DECAPPING ENZYME 1A, PUTATIVE-RELATED 4 65 - -
Aip03g03932 153 Gene3D - 1 40 IPR011993 -
Aip03g03932 153 ProSiteProfiles TPR repeat profile. 97 130 IPR019734 GO:0005515
Aip03g03932 153 Gene3D Tetratricopeptide repeat domain 63 149 IPR011990 GO:0005515
Aip03g03932 153 SMART tpr_5 97 130 IPR019734 GO:0005515
Aip03g03932 153 PANTHER TRANSCRIPTION FACTOR SMIF DECAPPING ENZYME DCP1 4 65 IPR010334 GO:0000290|GO:0008047|GO:0043085
Aip03g03932 153 SUPERFAMILY TPR-like 84 140 IPR011990 GO:0005515
Aip03g03932 153 SUPERFAMILY PH domain-like 4 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03932 Aip-Chr3 122297141 122300722 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03932 84 141 Calmodulin-binding Proteins AT3G25230 41.379 1.48e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03932 K24926 - aip:110270710 132.88