Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03922 ATGGCTTTCCGCATCTCTTGCTCGGTGTCGGAGCTCGGAGGCGGCAACTGTTTTCTGCGTCTCTTGCTCGGTGTCGATGTCGGTCTTGCCCTTGTTGAAGGAATAGTTGCTTCGTTGCGTTGTTTCAGGGACTGGTATAACCTTGAGAAGTCGAAGCAGGTGAAGGCATTTCGTTGTGGAGAGTATGATGAGTGCATCGAGAAGGCAAAGGCATCTGCTGCTAATTCGAATAAGAAGGCGGTGAAGTATGCTCGCAGGGAGGATGCTAGTtctggaaTTGCTCCATCCTGGTTCATTCACTTTGATTTTCTTGGCTTGGTGGAGAAATTTTACTATCTCTCTGGCAGATATGACATTGAGCTGACTATTGGTGATGCTGTCATGGAGAACTCTTTCTTACGGCCACTTGGACATCTTGAATTAGATCTTCCAGAAGCACCTACTATCAAGGCACCCCATCTTCCTCTACTAGATGTTGATCCATACACGAGATATGGGCCCAAAGCAGAGATAACCCACTTATTCAGGACTCCTGAAAGTAAAGTTGCTGTAGAAGGGAGAGTTCAGTTTGATCTGCTCCAGGTCATCTTCACCGGTTCGATGGAGGTAGGCCGTGAAATAATGCATGCTACAGCTAGCAGCAACTTGAAACAAGTTTCACTTGAATTAGTAGGAAAGTCACCTCTTCTAATCTTTGATGATGCTGATGTAGATAAAGCTACTAGCCTTGCTCTCTTGGGCATAGTATATAACAAGACAGTAGACTATAAGAGACCAACCTATGAAGAAGTTGAGAACCTCCAAGCCTTACTTCCAAGGGAGTGCAATATCTGCCAAATGCAAATCGGCGAAATGCCAGCCACCTCCGACCACCATCGTCAAGGCCTTGCCACTGTTCGTTTCAGCCGGCCCACTCACTGCATCATCACCACACTGCCCCGTGCGCCCTCTTCCGCGTCGTTCGTCGCTCTTCTCTTTACCGGCGTCTCTGACATCTTCGACCATTTCTGTCTTATCCCTGatggaaaatggggacccgcgggaaacacggagaacgtggggaatggagatgggggcaattatccccatagcgaaaaatggggcggggacggggacaaaatttaa 1125 0.4302 MAFRISCSVSELGGGNCFLRLLLGVDVGLALVEGIVASLRCFRDWYNLEKSKQVKAFRCGEYDECIEKAKASAANSNKKAVKYARREDASSGIAPSWFIHFDFLGLVEKFYYLSGRYDIELTIGDAVMENSFLRPLGHLELDLPEAPTIKAPHLPLLDVDPYTRYGPKAEITHLFRTPESKVAVEGRVQFDLLQVIFTGSMEVGREIMHATASSNLKQVSLELVGKSPLLIFDDADVDKATSLALLGIVYNKTVDYKRPTYEEVENLQALLPRECNICQMQIGEMPATSDHHRQGLATVRFSRPTHCIITTLPRAPSSASFVALLFTGVSDIFDHFCLIPDGKWGPAGNTENVGNGDGGNYPHSEKWGGDGDKI 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03922 374 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 225 251 IPR016163 GO:0016620
Aip03g03922 374 SUPERFAMILY ALDH-like 195 251 IPR016161 GO:0016491
Aip03g03922 374 Pfam Oligosaccharyltransferase subunit Ribophorin II 79 181 IPR008814 GO:0006487|GO:0008250|GO:0016021
Aip03g03922 374 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 2 99 185 - -
Aip03g03922 374 PANTHER RIBOPHORIN II 99 185 IPR008814 GO:0006487|GO:0008250|GO:0016021
Aip03g03922 374 MobiDBLite consensus disorder prediction 349 374 - -
Aip03g03922 374 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 194 224 IPR016162 GO:0016491
Aip03g03922 374 Pfam Aldehyde dehydrogenase family 194 251 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03922 Aip-Chr3 122109739 122116301 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03922 189 252 Aldehyde Dehydrogenase Gene Family AT3G24503 68.750 8.95e-20 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03922 K12667 - ahf:112775503 404.445