Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03915 ATGAAAAAGAAATTCAACCCTCCTATTATGGCAAAAACACTGCTGCTTCTTTTTTTCCTCTCAGCTCTGACCTCAAGGATTACTCACCAACAAGAGATCTTCTTTGAAGGCTTCAATGGTGGTGAAGCCGCCGTAAACATGTCCCTAAACGGTGGCGCAGTTATTTACCAAAGCGGCACACTTGGTTTAACAAACGACACTCAGAAGGTGGTTGGTCACGCGTTTTACTCGACCCCAATCCAATTCAAGAACAAGAGCAAAGTTGTCTCCTTTTCCACCGCATTTGCATTCGCAATAGTCCCTCAGTACCCAACACTCGGTGGCCATGGCTTCGCCTTCACCATTGCTCCCTCCAAAGACCTTCCCAACGGTTACCCAAGCCAGTACTTGGGCCTCCTCGGCCCAAAAAACCTCGGCAACTTCTCCAACCACCTCTTCGCGGTGGAGTTTGACACCGTTCAAGACTTCGAGTTCGGAGACATCAGTGACAATCACGTGGGCGTTAACCTCAACAACATGGCCTCCAACAAATCCGTTAAAGCAACTGTTTTGGGACAAGAAGAGCTGAACTTGAAGAGTGGCAAAGTGATTCAAGCATGGGTTGATTATGACTCCTCAAAGAACCAATTGGAGGTTCGTCTCTCCCAAACCTCAACAAAACCCAATTCTCCTATCTTGTCGTACGAGGTTGATCTCTCACCGATTCTCAAGGATTCCATGTACGTTGGATTCTCCTCTTCAACAGGGATGCTAGCTAGCTCTCACTATATCTTGGGCTGGAGCTTCAACATCAACAATGGAGACGCCAAAACCCTCTCCTTGAAGAACCTCCCTCCACTCCCTTCGCGAGACAAACCCCATAGAAGGTCCTTAATCTTAGGGCTCTCTCTCTCAGCTTCGATATTGCTCCTCTGCTCCATTGCCTTATCATTCTACCTCACCAAAAAGCTGAAAAACGCAGAAGTAATCGAACCGTGGGAGCTAGAAGTTGGTCCACATAGGTTCCCCTACAAGGAGCTGAAGAAAGCTACCAGAAACTTCCACCACAAGAACATGCTCGGCTTCGGCGGCTTCGGCGCGGTTTTCAAGGGAACACTGGCAAACAACACCGAAATCGCAGTGAAGCGAGTCTCCCATGACTCCAAACAGGGATTCCAAGAATTCGTGTCGGAAATCGAGACCATAGGAAGGTTGCGCCACAGGAACCTCGTACAGCTCCAAGGTTGGTGCAGAAACCACATCGATCTTCTATTAGTATACGACTTCATGCCAAACGGAAGCTTGGACAAGCACCTGTTCGAAGATTCACCAAGAAAAACGCTAACATGGGAACAGAGGTTCAAGATTGTGAAGGGCGTGGCTTGCGGACTCTTGTACCTTCACGAGGAATGGGAACAGACGGTGATTCACAGGGATATCAAAGCAGGGAACGTTCTGTTGGACGCTGACATGAACGCGCGCCTCGGCGACTTTGGTTTGGCCAAGCTATATGAGCGTGGTTCCAACCCGAGCACCACCAGGGTGGTAGGGACGCTGGGGTACCTTGCGCCGGAGCTAACGAGGACGGGGAGGCCAAGCACGTCTTCCGATGTTTATGCGTTTGGAGCGCTGCTGTTGGAGGTGGTGTGCGGGAGGAGGCCGGTGGAGGCGAAGGCGCTGCCGGAGGAGCTTGTTCTGGTGGAGTGGGTGTGGGACCGGTGGCGCTTGGGGGCGGTGTTGGAGGTGGTGGACCCCAAGCTTGGCGGAGTTTATGATGAGCTGGAGGTTGTGGTGGTTATCAAGTTGGGGTTGCTGTGTTCGTGTGAGGTGCCGGAAATGAGGCCAACTATGAGGCAGGTTGTGCGCTTCTTGGAAGGGGAGATCCCGTTGCCGGAGGGGATTCCTCCGCCGGATGGCTTTGGTGGTGGAAAGTCTGGACATTCGTATGGCGGGAACACGTGGTTGTCGCCGCTTGATGATGACGTGGAGGGTACAAGGGATGAGGATGGTAGCTAG 1995 0.5178 MKKKFNPPIMAKTLLLLFFLSALTSRITHQQEIFFEGFNGGEAAVNMSLNGGAVIYQSGTLGLTNDTQKVVGHAFYSTPIQFKNKSKVVSFSTAFAFAIVPQYPTLGGHGFAFTIAPSKDLPNGYPSQYLGLLGPKNLGNFSNHLFAVEFDTVQDFEFGDISDNHVGVNLNNMASNKSVKATVLGQEELNLKSGKVIQAWVDYDSSKNQLEVRLSQTSTKPNSPILSYEVDLSPILKDSMYVGFSSSTGMLASSHYILGWSFNINNGDAKTLSLKNLPPLPSRDKPHRRSLILGLSLSASILLLCSIALSFYLTKKLKNAEVIEPWELEVGPHRFPYKELKKATRNFHHKNMLGFGGFGAVFKGTLANNTEIAVKRVSHDSKQGFQEFVSEIETIGRLRHRNLVQLQGWCRNHIDLLLVYDFMPNGSLDKHLFEDSPRKTLTWEQRFKIVKGVACGLLYLHEEWEQTVIHRDIKAGNVLLDADMNARLGDFGLAKLYERGSNPSTTRVVGTLGYLAPELTRTGRPSTSSDVYAFGALLLEVVCGRRPVEAKALPEELVLVEWVWDRWRLGAVLEVVDPKLGGVYDELEVVVVIKLGLLCSCEVPEMRPTMRQVVRFLEGEIPLPEGIPPPDGFGGGKSGHSYGGNTWLSPLDDDVEGTRDEDGS 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03915 664 PANTHER L-TYPE LECTIN-DOMAIN RECEPTOR KINASE IV.2-LIKE PROTEIN 17 635 - -
Aip03g03915 664 Gene3D Phosphorylase Kinase; domain 1 308 422 - -
Aip03g03915 664 SMART serkin_6 347 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g03915 664 Gene3D - 33 277 - -
Aip03g03915 664 Pfam Legume lectin domain 34 276 IPR001220 GO:0030246
Aip03g03915 664 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Aip03g03915 664 CDD STKc_IRAK 353 619 - -
Aip03g03915 664 MobiDBLite consensus disorder prediction 627 664 - -
Aip03g03915 664 PANTHER - 17 635 - -
Aip03g03915 664 ProSitePatterns Protein kinases ATP-binding region signature. 353 375 IPR017441 GO:0005524
Aip03g03915 664 SUPERFAMILY Protein kinase-like (PK-like) 329 625 IPR011009 -
Aip03g03915 664 Pfam Protein kinase domain 347 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g03915 664 Gene3D Transferase(Phosphotransferase) domain 1 423 625 - -
Aip03g03915 664 SUPERFAMILY Concanavalin A-like lectins/glucanases 43 270 IPR013320 -
Aip03g03915 664 CDD lectin_legume_LecRK_Arcelin_ConA 35 265 IPR001220 GO:0030246
Aip03g03915 664 ProSiteProfiles Protein kinase domain profile. 347 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03915 Aip-Chr3 121951736 121953940 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03915 31 631 Receptor kinase-like Gene Family AT3G55550 60.458 0.0 743
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Aip03g03915 Pkinase 3.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03915 - - adu:107480854 1271.14