Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03912 ATGAAAGGGTTTGGGTCTTCATGTGGAGCATGCAAGTACCTAAGGAGAAGATGCACAAGAGATTGTGTATTTTCTCCTTACTTCTCCTATGATGAGGCATCAACCCATTTTGCGGCAGTTCATAAGGTGTTTGGTGCTAGCAACGTCTCTAGACTGTTGCTACACCTTCCGTTGCACAACAGAAGTGACGCTGCTATCACCATAACTTACCAAGCTCTCGCTCGCATGCACGATCCTATCTATGGTTGTGTTGCTTATATCTATCTATTGCAGCAACAGGTTGCAAGCTTGCAAAGGGAGATAGATGATATACTAGGGAATAATTTCATGATGAAGAATTCCTCGTGTCTTGGTGTTGAGAATTATTGTGGCAATGTTCATCAATCACCGATGATGAACATCAACAACGGGATAGAGTATACTGTGCAAGAAGGAACAAGGAGTCAATGTTATAAAAGTCAACTAGCTAATCAATTTTCTAGCGATGAAGAAATTGACAGAGAGTATGAAAGATTATTATTGATGGACACCGATAATTTATTATATGGTGAGACAGACCCCATCTCCCTGGAGAAGTTTCTGTCTGGAATTGACCAGGATGTGTTCCTTAATCATCCATGGTTCAAGCATAATAATAATAATGCTGACATTATTGGAAACTAG 663 0.4012 MKGFGSSCGACKYLRRRCTRDCVFSPYFSYDEASTHFAAVHKVFGASNVSRLLLHLPLHNRSDAAITITYQALARMHDPIYGCVAYIYLLQQQVASLQREIDDILGNNFMMKNSSCLGVENYCGNVHQSPMMNINNGIEYTVQEGTRSQCYKSQLANQFSSDEEIDREYERLLLMDTDNLLYGETDPISLEKFLSGIDQDVFLNHPWFKHNNNNADIIGN 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03912 220 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Aip03g03912 220 Pfam Lateral organ boundaries (LOB) domain 7 102 IPR004883 -
Aip03g03912 220 PANTHER LOB DOMAIN-CONTAINING PROTEIN 33 1 215 - -
Aip03g03912 220 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03912 Aip-Chr3 121908205 121909742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03912 1 176 AS2 family AT5G06080 51.955 6.94e-55 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aip03g03912 LOB 3.2e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03912 K13945 - gmx:100787638 229.18