Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03909 ATGGAGGAAACACATCATGATGGTACTGATCAGGATCAGTACTCGATGTGGATGAAGAGAAAAGAAATCTTGAAGTCGCATATTCAAGTAGCACCCTTTGGAATAAGCGGCAATAATTCATCATCATCATCATCATGGGAAGAAAGGGCATTTGCTGAAGATGCAGCAAGGATTCTAGGTGGATGCATATGGCCGCCAAGATCATACTCATGCAGCTTCTGCAAAAGAGAGTTCAGGTCTGCTCAAGCTCTTGGGGGACACATGAATGTTCATAGGAGGGACAGAGCTAGGCTCAAACGAAGCCTTAGCCCTCATAATCATCATCATCATGGCAAAAATGATTGTAAGTCATCATTATTATTAGGTACTTCTCATCATCACCATCATCAATCTTCCGGTGAGAATTACTATCAGTACTACTCTAGTAGCTTTATTGGAACTACTGATAATAATTATAAAGCTATGAGTAGCAGCAAACCTTCATCGTCTGATTCAGAACCAAAAGAAGGAAAAGTCAATGCAATAATAAGTAGTTATTGTAATGATGGTGATTATGTTGAAACAAGTTTGTGTGTGGGGTATAATAATTCATCGTCATCATTATGTGGGAACGAAGAATCTTATTGTAAAAGGCCTAAGAGGACAAATTCTTCAATGTTTTCTTCGTTTCTGAAGCCATGTTCAAATGATAGAAGGCTGCAGGTGACTTTATTGCAGTCTGCAGAATCATTTGCAGTACCTACTGGAACTGAAATGGAAGATTTGGATCTTGAACTCAGGCTGGGGAAACCGCAGAAAATTTAG 804 0.393 MEETHHDGTDQDQYSMWMKRKEILKSHIQVAPFGISGNNSSSSSSWEERAFAEDAARILGGCIWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKRSLSPHNHHHHGKNDCKSSLLLGTSHHHHHQSSGENYYQYYSSSFIGTTDNNYKAMSSSKPSSSDSEPKEGKVNAIISSYCNDGDYVETSLCVGYNNSSSSLCGNEESYCKRPKRTNSSMFSSFLKPCSNDRRLQVTLLQSAESFAVPTGTEMEDLDLELRLGKPQKI 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03909 267 ProSiteProfiles Zinc finger C2H2 type domain profile. 69 96 IPR013087 -
Aip03g03909 267 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 11 266 - -
Aip03g03909 267 ProSitePatterns Zinc finger C2H2 type domain signature. 71 91 IPR013087 -
Aip03g03909 267 SUPERFAMILY beta-beta-alpha zinc fingers 66 96 IPR036236 -
Aip03g03909 267 Pfam C2H2-type zinc finger 69 93 - -
Aip03g03909 267 SMART c2h2final6 69 91 IPR013087 -
Aip03g03909 267 PANTHER OS07G0101800 PROTEIN 11 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03909 Aip-Chr3 121871774 121872577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03909 40 101 C2H2 Transcription Factor Family AT2G37740 74.194 3.28e-26 102