Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03901 ATGGCTGGGATTTGCTGTGGTGTTGTTGGAGAAGGCGAAGCAACGGCTCCAATCGAGCCAAGCCAACGCCCGTCCAGGCGAAGGAGCCTAGACTTGCTTTCTTTGAGGTTAATGACCGACGTGGCGACGGTGGCGGCGCCCGAGGCTTCCCGGAAACGGCAGAGGATGGACCTTTGCGCGGTTCCCAGGGAGCGCGGCAACGTCGCGGAGAACCGCGGCTCCTTTGTTGCCGGGCAGAACAAGGAGGACGGATCTAAGCAGCTGGTTAACAACGAAGATGGCACAGTTTCGGAAACGAAACGGTCCAAGGTTTCTTCTCAGTTGAGTTTGACGGCGGAAGGTTTGGGAAATGAGAAGGTTTTTGAAGAGTGTCCGAAGTTCGGCGTGACTTCCGTTTGCGGAAGGAGACGAGACATGGAGGATTCGGTTTGTGTGCGTCCTTCTTTCTGCGATGAGAGTCACAGAGGGTTCCATTACTTCGGCGTGTTTGACGGTCACGGTTGCTCACATGTTGCGACGCTGTGCAAGGAGAGGCTGCATGATATTGTGAAGGATGAAATCAGTGGAGCGAAGAAGGATGAACAAGAGTTGGAATGGAAATCCGTGATGGAGCATGGGTTCTTGCGCATGGACGACGACGTACACATCTGGAGCAAGGCGAATCACTCCTCCGCCTGCCGCTGCGAGCTTCAGAGTCCACACTGCGACGCTGTCGGATCCACTGCCGCTGTCGCCGTCGTCACCTCCGAGAAGATCGTTGTCTCCAACTGCGGCGACTCACGCGCGGTGCTCTGCCGCAACGGCGTGGCCATCCCCCTGTCCTCCGATCACAAGCCTGACCGACCCGACGAACTGATCCGGGTTCAAGCAGCAGGAGGGCGCGTGATCTATTGGGATGTTCCCAGGGTGCTTGGGATGCTAGCCATGTCTAGAGCCATAGGGGATAATTATCTGAAACCGTACGTGATCCCGGAACCGGAGGTGACCGTTACTGAGAGGAGACACGATGATGAGTGTTTGATTATTGCGAGTGACGGTTTGTGGGACGTGGTGTCAAATGACACTGCGTGCGGGGTGGTGCGGATGTGTCTCAAGGCGCAGAAGCCGCCGTCGCCGCCGGGGTCTCCGTCGGGGAGTGGCGTGGCAGCGGACGGATCCGATAGGGCGTGCTCAGATGCTTCCATTCTGCTGACGAAGTTGGCGCTGGCGAGGCACAGCGAGGATAATGTGAGCGTGGTGGTAGTTGACTTGAGGAGGGGCCAACAACGGACTAATCCCAACAATAACGACAACGTTAATTGA 1302 0.5699 MAGICCGVVGEGEATAPIEPSQRPSRRRSLDLLSLRLMTDVATVAAPEASRKRQRMDLCAVPRERGNVAENRGSFVAGQNKEDGSKQLVNNEDGTVSETKRSKVSSQLSLTAEGLGNEKVFEECPKFGVTSVCGRRRDMEDSVCVRPSFCDESHRGFHYFGVFDGHGCSHVATLCKERLHDIVKDEISGAKKDEQELEWKSVMEHGFLRMDDDVHIWSKANHSSACRCELQSPHCDAVGSTAAVAVVTSEKIVVSNCGDSRAVLCRNGVAIPLSSDHKPDRPDELIRVQAAGGRVIYWDVPRVLGMLAMSRAIGDNYLKPYVIPEPEVTVTERRHDDECLIIASDGLWDVVSNDTACGVVRMCLKAQKPPSPPGSPSGSGVAADGSDRACSDASILLTKLALARHSEDNVSVVVVDLRRGQQRTNPNNNDNVN 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03901 433 MobiDBLite consensus disorder prediction 70 102 - -
Aip03g03901 433 CDD PP2Cc 126 417 IPR001932 -
Aip03g03901 433 Pfam Protein phosphatase 2C 127 409 IPR001932 -
Aip03g03901 433 PANTHER PROTEIN PHOSPHATASE 2C 37 69 421 - -
Aip03g03901 433 ProSiteProfiles PPM-type phosphatase domain profile. 126 417 IPR001932 -
Aip03g03901 433 PANTHER ALPHABET, ISOFORM E-RELATED 69 421 - -
Aip03g03901 433 MobiDBLite consensus disorder prediction 78 102 - -
Aip03g03901 433 ProSitePatterns PPM-type phosphatase domain signature. 159 167 IPR000222 GO:0043169
Aip03g03901 433 Gene3D - 120 425 IPR036457 -
Aip03g03901 433 SUPERFAMILY PP2C-like 124 418 IPR036457 -
Aip03g03901 433 SMART PP2C_4 114 415 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03901 Aip-Chr3 121750885 121753069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03901 1 392 PP2C-type Phosphatase Gene Family AT3G11410 55.112 3.12e-141 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03901 K14497 - gmx:100796161 514.227