Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03872 ATGTCCAAAAACGAGGATGATGTGAAGAATGATTTTGATAATGATTTGGGTGATGATTTCGATTATCAACCGAATGCAGAAGATGATGCTGAAGACGACGATGTGGATTCACTGGATTCTACTAGCAAGAGTGAAGAAGACGACGTGGTTAGGGATAATCAAGGTAGAATCATTAGCAGGCAACTTGTTTGCAATAAGGAGGGCTGGAGGAATATGAGGTATCTTGATCTGGATGATAGATCAAGGGAGGCAAGGTCACTAACGCGAACTAAGTGTCCAACTCGGCTTAGGGTAAAGCTTGACTACGGCTGCGGTAGATGGAAGGTAACATGTTTTGTTGAATCTCACAACCACGATCTGACGCCACCCCAATTTGCACATCTGGTTCCAGCCAATCGTCGTCTCACTGTCACTGATAAAGTCCAAGTGGAAAATCTTCATAATTTTGGTGTCAAGACCTGCCATATTATGGGGTATATTGTGTTCCAGAAGGGTGGATATCGTCATGCTGGCTTCACACGCAAAGATTTGTACAACCACATTGATCGTTATCATCGGTCAAAGGTTAAAAATGGGGATGCCAATGCGGCAATAAACTATTTGATTGGCAAGTCAAACAACGATCCGCTGTTCTTTGGAAAGTATACGTTCACTAGTGATGAAAGGCTCGAGCATATTTTTTAG 684 0.4269 MSKNEDDVKNDFDNDLGDDFDYQPNAEDDAEDDDVDSLDSTSKSEEDDVVRDNQGRIISRQLVCNKEGWRNMRYLDLDDRSREARSLTRTKCPTRLRVKLDYGCGRWKVTCFVESHNHDLTPPQFAHLVPANRRLTVTDKVQVENLHNFGVKTCHIMGYIVFQKGGYRHAGFTRKDLYNHIDRYHRSKVKNGDANAAINYLIGKSNNDPLFFGKYTFTSDERLEHIF 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03872 227 Pfam FAR1 DNA-binding domain 52 121 IPR004330 -
Aip03g03872 227 PANTHER OS02G0262500 PROTEIN 64 227 - -
Aip03g03872 227 MobiDBLite consensus disorder prediction 1 52 - -
Aip03g03872 227 MobiDBLite consensus disorder prediction 11 41 - -
Aip03g03872 227 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 64 227 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03872 Aip-Chr3 121315147 121315957 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip03g03872 FAR1 2.2e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03872 - - ahf:112742151 398.282