Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03871 ATGGAAGGAGGAGCTGCCCCACCTGCTGACGCTGTCATGTCCGACGCGGCGCCTCCGCCGCAGGACCATCAACAGCAGCACCAGCAGCCGGCAGCGCCCACGGGTGTGGAGAATATTCCGGCGACGCTGAGCCACGGCGGTAGGTTCATCCAATACAACATATTTGGGAACATATTCGAAGTCACCGCCAAATACAAACCCCCCATTATGCCCATCGGAAAAGGCGCTTATGGCATCGTTTGTTCCGCTCTAAATTCGGAGACGAATGAGCATGTTGCCATTAAGAAGATTGCCAATGCATTTGACAACAAGATTGACGCCAAGAGGACCCTCCGTGAAATCAAGCTGCTTCGTCACATGGATCATGAAAACGTGGTTGCAATAAGGGATATAGTGCCACCACCTCAGAGGGAGGCATTCAATGATGTTTACATTGCCTATGAGTTGATGGACACTGATCTTCACCAAATCATTCGCTCGAATCAAGCATTGTCAGAGGAGCACTGTCAGTACTTTCTGTATCAAATCCTCCGTGGTTTGAAGTACATACATTCAGCAAATGTTTTGCATAGGGACTTGAAACCTAGCAACCTTCTCCTGAATGCCAACTGCGACTTAAAAATTTGTGATTTTGGACTGGCCCGTGTCACCTCTGAGACTGATTTCATGACTGAATATGTTGTGACAACAATGTGCTTTCTAGATATTCAACTTTTGGTTAACACATTAAACCATCGTTGCAGTCTATGGTCTGTTGGTTGTATCTTCATGGAACTGATGGATCGAAAACCATTGTTCCCTGGCAGAGATCACGTGCATCAACTGCGTCTACTTATGGAGCTCATTGGCACCCCATCAGAAGCTGATTTGGGATTTCTGAATGAAAATGCTAAGAGATACATTAGGCAACTCCCTCTTTACCGACGCCAATCTTTCCAAGAAAAGTTTCCTCAGGTCCATCCTGCTGCCATTGATCTTGTTGAAAAGATGTTGACCTTTGATCCTCGACAAAGGATTACTGTTGAAGATGCACTGGCACACCCGTATCTGACATCGCTGCATGACATAAGTGATGAACCGGTGTGCATGACCCCCTTCAACTTTGATTTTGAGCAGCATGCTTTGACAGAGGAGCAGATGAAAGAACTGATATACAGAGAGGCTCTAGCATTTAACCCTGAATATCAGTAA 1191 0.4626 MEGGAAPPADAVMSDAAPPPQDHQQQHQQPAAPTGVENIPATLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIVPPPQREAFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMTEYVVTTMCFLDIQLLVNTLNHRCSLWSVGCIFMELMDRKPLFPGRDHVHQLRLLMELIGTPSEADLGFLNENAKRYIRQLPLYRRQSFQEKFPQVHPAAIDLVEKMLTFDPRQRITVEDALAHPYLTSLHDISDEPVCMTPFNFDFEQHALTEEQMKELIYREALAFNPEYQ 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03871 396 Gene3D Transferase(Phosphotransferase) domain 1 150 377 - -
Aip03g03871 396 SUPERFAMILY Protein kinase-like (PK-like) 71 358 IPR011009 -
Aip03g03871 396 Gene3D Phosphorylase Kinase; domain 1 49 387 - -
Aip03g03871 396 MobiDBLite consensus disorder prediction 1 40 - -
Aip03g03871 396 ProSitePatterns MAP kinase signature. 101 204 IPR003527 GO:0004707|GO:0005524|GO:0006468
Aip03g03871 396 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 28 395 - -
Aip03g03871 396 ProSitePatterns Protein kinases ATP-binding region signature. 72 96 IPR017441 GO:0005524
Aip03g03871 396 SMART serkin_6 66 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g03871 396 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Aip03g03871 396 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 28 395 - -
Aip03g03871 396 ProSiteProfiles Protein kinase domain profile. 66 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g03871 396 Pfam Protein kinase domain 71 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g03871 396 MobiDBLite consensus disorder prediction 19 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03871 Aip-Chr3 121298487 121304125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03871 1 396 MAP Kinase Gene Family AT2G43790 82.456 0.0 646
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Aip03g03871 Pkinase 5.6e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03871 K14512 - gmx:547616 702.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03871 03 121298487 121304125 Aip05g00984 05 13941248 13943653 PCT