Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03869 ATGACGAAGACGACGACAAGGCCTCCAGGCAAGATAGCCTCCGCCTGTTCCCACGCAACGCTGCCACCTCCGACGGCACCCACCCCAAGCCCCGCGGCGGCCCCGGCGCCGCCTCAAGCCCGCGCACAGATTACCTCTACCTCGGCACGGTGGCTAGTTCAGAGCCACCGGATTCAAGCTCCAGCAGCACCGTTCCGAAAACTGAATGATTCGCCGGAACTGAAACCACTGCCTCCCCTGCCCCGCCACAATTTCCGGCCATGGCTGAGTGAAGAAGAAGACAAGGACGAAAAACACAAGGAGAATCAAGACGAAGAAGAGGAACAGTTCTTTTCTCCGAGAGGCTCTTCCGGTAACAGACAAGAGAGTCCTCCTTCCCCTGTTGCGGTTCTTGGAGTCGAAGATTCAAGTTCTCGTTCACCGGAGGCTTTTCCTTTGGAGAAACTCGGATGCAGAAGCTTAAACTCAAGAACCCCATCTCATTCTCGTTCTTGTTCCCCTCACAGCCCTGAAAGCACCAAATCACTGCCACCACCTAATCAGAACCCAGTTTCTGCGTCGCAGTCGCCGTCTTCTTTGTGTTCTTCTTCTTCTTCTCCTAAGCCTAGAGAGGAGTTGAGATCCAGTTGGGATGTTCCGGCCACCGAACTGCCTCCTCCTCCTCCTCCGCCACCACCACCGCCGCCTCCGCCGAGGTTCTGGGAGACTCCGGTGATGAATAAATTGGCGCCAAATGTTGATAAGAATGAGAGTGAGGAAACTCCGAAGCCAAAGTTAAAAGCTTTGCATTGGGATAAAGTGAAAGCTAGTTCTGATAGGGCAACGGTGTGGGATCGCTTGAGACCAAGTTCTTTCCAATTGAACGAGGACATGATTGAGACGCTGTTCATGGTTAATAACTCAAAGGAAAATCCTACATTGGCTTTTAGAGATAATAATGGCCGCCGTGGTCAAACGGTTCATTCTTCACCGGTGCCGCCGGAGAATAGGGTGCTTGACCCCAAGAAGTCTCAGAACATTGCTATTTTGCTTAGGGCGCTCAATGTAACTATTGATGAAGTTTGTGAAGCTCTCAGGGAAGGCAACTGTGATACACTGGGAACAGAACTTCTGGAGAGTTTGTTGAAGATGGCTCCAACCAAAGAAGAAGAAACTAAGCTGAGGGAGTTCCAAGACGAATCGCCCTTCAAGCTTGGACCTGCTGAGAAATTTCTCAAGATCATGCTTGATATACCTTTTGCATTTAAGAGAGTGGAAGCTATGCTCTACATTGCTAATTTTGATTCTGAATTAGAATACCTTAAAAAGTCCTTTGAGACTCTGGAGGTGGCTTGTGAGGAATTGAGGAACAGCAGAATGTTTTTGAAGTTACTTGAAGCTGTTCTCAGAACTGGAAACCGAATGAATGTTGGCACTGATCGGGGCGATGCGCATGCATTCAAGCTGGACACGCTTCTGAAGCTCGTTGATATTAAAGGAACTGATGGAAAGACCACTCTATTGCATTTTGTTGTACAGGAAATCGTCAGAACCGAGGGATCTCATATTTCCGGTTCTAACAATCATCAGGCCTCCGAGAACAACCAGCAATATACTCTTCAAGATGAGGTTGAATTCCGGAAGCTTGGACTGCAAGTTGTTTCGGGCTTGAGTGGTGAGCTCACCAATGTGAAAAAAACAGCTACCATGGACTCAGACATGCTTAGCAGCGATGTTGCTAAACTTGCTAAGGGGATCGAGAAAGTTGTGGAAGTTGTCAAACTGAATGAAATGTCACCCTTGAAAGACACTAGCCAAAAGTTTTCTGAGGCAATGAAATGTTTCTTGGAGAAAGGAGGAGAAGAAATTTTAAGAATCCAGAACCAAGAGAAAAGGGCTCTCTCTTCAGTAAAGGAGATAACTGAGTATTTCCATGGGAATTCAGCAAAGGAAGAAGCTCATCCGTTTAGGATTTTTATGGTAGTGAGGGATTTCCTTTCGATATTAGATGGTGTGTGCAAGGAAGTTGGGAAAGCAAATGAGAGGACTCTAGTTGGTTCTAGACAATCTGTAATGCCTGCAAACCCTGTAACGCCAGCAATTTTTCCTATTATTACTGGTAAGCAGCCATGTGATTCATCTGAATCTGATTAA 2133 0.4726 MTKTTTRPPGKIASACSHATLPPPTAPTPSPAAAPAPPQARAQITSTSARWLVQSHRIQAPAAPFRKLNDSPELKPLPPLPRHNFRPWLSEEEDKDEKHKENQDEEEEQFFSPRGSSGNRQESPPSPVAVLGVEDSSSRSPEAFPLEKLGCRSLNSRTPSHSRSCSPHSPESTKSLPPPNQNPVSASQSPSSLCSSSSSPKPREELRSSWDVPATELPPPPPPPPPPPPPPRFWETPVMNKLAPNVDKNESEETPKPKLKALHWDKVKASSDRATVWDRLRPSSFQLNEDMIETLFMVNNSKENPTLAFRDNNGRRGQTVHSSPVPPENRVLDPKKSQNIAILLRALNVTIDEVCEALREGNCDTLGTELLESLLKMAPTKEEETKLREFQDESPFKLGPAEKFLKIMLDIPFAFKRVEAMLYIANFDSELEYLKKSFETLEVACEELRNSRMFLKLLEAVLRTGNRMNVGTDRGDAHAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIVRTEGSHISGSNNHQASENNQQYTLQDEVEFRKLGLQVVSGLSGELTNVKKTATMDSDMLSSDVAKLAKGIEKVVEVVKLNEMSPLKDTSQKFSEAMKCFLEKGGEEILRIQNQEKRALSSVKEITEYFHGNSAKEEAHPFRIFMVVRDFLSILDGVCKEVGKANERTLVGSRQSVMPANPVTPAIFPIITGKQPCDSSESD 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03869 710 Gene3D Formin, FH2 domain 255 686 IPR042201 -
Aip03g03869 710 Coils Coil 89 109 - -
Aip03g03869 710 MobiDBLite consensus disorder prediction 306 325 - -
Aip03g03869 710 PANTHER FORMIN-RELATED 60 707 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Aip03g03869 710 Pfam Formin Homology 2 Domain 251 662 IPR015425 -
Aip03g03869 710 MobiDBLite consensus disorder prediction 178 203 - -
Aip03g03869 710 PANTHER FORMIN-LIKE PROTEIN 2 60 707 - -
Aip03g03869 710 MobiDBLite consensus disorder prediction 214 235 - -
Aip03g03869 710 MobiDBLite consensus disorder prediction 306 332 - -
Aip03g03869 710 MobiDBLite consensus disorder prediction 40 54 - -
Aip03g03869 710 MobiDBLite consensus disorder prediction 86 111 - -
Aip03g03869 710 MobiDBLite consensus disorder prediction 1 237 - -
Aip03g03869 710 ProSiteProfiles Formin homology-2 (FH2) domain profile. 249 688 IPR015425 -
Aip03g03869 710 SMART it6_source 249 677 IPR015425 -
Aip03g03869 710 MobiDBLite consensus disorder prediction 153 171 - -
Aip03g03869 710 SUPERFAMILY Formin homology 2 domain (FH2 domain) 220 675 - -
Aip03g03869 710 MobiDBLite consensus disorder prediction 22 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03869 Aip-Chr3 121281175 121285017 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03869 251 702 FH2 protein (formin) Gene Family AT3G25500 66.886 0.0 606
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03869 - - adu:107480832 1153.27