Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03853 ATGGGTTCAGGCCATTGGTTTAAGACAATCATTCGATTAAGAAAATCAAAGCAAAGCAGATCAAAGAAATCAAAGGGATCTTTAGCTTCATTGAAGATAAAGAATAATACAGAAAGAGAGTCTAGTGGTTTAGCAAATGGAACTAGTACTGCAAGTGAAAATCTTGTGTCCTCTGGGCTACCACTTGAAACTATTGCTGCAACAAGAATACAGATGGCATTCCGGGCATACAAGGCTAGAAAATCTTTAGGCCGATTAAAAGGATTGGCAAAGCTAAAGATTCTGACAGAAGGTTACTCTGTTAGAAAACAAGCTACTACAGCCATAAATTATCTTCACTCATGGAGTAAGATACAGACAGATATTAGAGCTCGCCGAATCTGTATGGTGACAGAAGACAGGATCAGGCGGAAGAAACTGGATTCACAGCTAAAGCTTGAAGCAAAGCTCCATGATCTGGAGGTGGATTGGTGTGGAGGCCCTGAAACCATGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCAGAGTCAAGGGCTAGGCAGTTATGAACTTGGCAAAGCTAACTGGGGTTGGAGCTGGAAGGAGTGCTGGATTGCGGCTCGCCCGTGGGAAAGCCGCATCCCCAACCTAACCGTGAGTCCCAAGAAAGCTCAAAATAAGTACTCAAGCCAAGGTCAGAAGGATAAGAACACATTGACACCAAATGGACAAGTTTCAGTTAAAGCTCCTTCACCTAATGTAAAAGGCACTCCTCCTTCTTTAGGTAGTGCAAAAGGGTCTACAAAAGCTAGGAGATTATCTTACCCAACCACACAGAAAATGGTGGTGCATGAAGGAAAGCAATGA 885 0.4 MGSGHWFKTIIRLRKSKQSRSKKSKGSLASLKIKNNTERESSGLANGTSTASENLVSSGLPLETIAATRIQMAFRAYKARKSLGRLKGLAKLKILTEGYSVRKQATTAINYLHSWSKIQTDIRARRICMVTEDRIRRKKLDSQLKLEAKLHDLEVDWCGGPETMXXXXXXXXXXXXXXXXXXXXXXXQSQGLGSYELGKANWGWSWKECWIAARPWESRIPNLTVSPKKAQNKYSSQGQKDKNTLTPNGQVSVKAPSPNVKGTPPSLGSAKGSTKARRLSYPTTQKMVVHEGKQ 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03853 294 Coils Coil 188 190 - -
Aip03g03853 294 MobiDBLite consensus disorder prediction 228 294 - -
Aip03g03853 294 Coils Coil 164 164 - -
Aip03g03853 294 PANTHER IQ-DOMAIN 5-RELATED 186 285 - -
Aip03g03853 294 PANTHER IQ-DOMAIN 5-RELATED 1 165 - -
Aip03g03853 294 MobiDBLite consensus disorder prediction 228 270 - -
Aip03g03853 294 ProSiteProfiles IQ motif profile. 63 91 IPR000048 GO:0005515
Aip03g03853 294 PANTHER IQ-DOMAIN 9 1 165 - -
Aip03g03853 294 PANTHER IQ-DOMAIN 9 186 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03853 Aip-Chr3 121138819 121140668 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03853 1 282 IQD Protein Family AT2G33990 42.808 7.87e-64 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03853 - - gmx:100813685 344.739
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03853 03 121138819 121140668 Aip03g03853 03 121138819 121140668 ECH
Aip10g00383 10 3811421 3817816 Aip03g03853 03 121138819 121140668 ECH