Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03852 ATGAATTTCCATTCAAATCTTTCTCAAGCACCTGCAAGAAGTTGTTGTCTCTACTTCTATTTATTCGTCTCCTTTCTTCTCCAAGTTGAGGCTACTGCTAATGGAGACAACAAAGTCATATCTATAGGCGCAATCATCGATGTTAACTCGCGTATTGGGAAAGAACAGCTAGTAGCCATGGACATTGCAGCTCAAAGTTACAATAACACTTCAAAGACCTACAAGCTGGCTCTTCATTTTCAGAACCCCACCATGAATCCCTTAAAAGCCACTTCCATTGCTGAAGATATGATTAAAAATCAGAACGTGGAAGTGATTGTGGGAATGCAAACATGGACAGAAGCAGCTTTGGTAGCTGAACTAGGAAGCCAGGCTCAAGTTCCTGTCATATCCTTCGCAGCACCTTCTGTTAGCTCACCATTGATGGCAAATCGATGGCCTTTTTTGGTGAGGCTAGATAACAAGGGCACTGCATATTCAAAATGCATAGCAGATATAGTTCATGCTTATGGCTGGCAAAGAGTAGTAGCCATTTATGAAGATGATGGCTACCGAGCTGCTAAAGCTAATTGA 573 0.4188 MNFHSNLSQAPARSCCLYFYLFVSFLLQVEATANGDNKVISIGAIIDVNSRIGKEQLVAMDIAAQSYNNTSKTYKLALHFQNPTMNPLKATSIAEDMIKNQNVEVIVGMQTWTEAALVAELGSQAQVPVISFAAPSVSSPLMANRWPFLVRLDNKGTAYSKCIADIVHAYGWQRVVAIYEDDGYRAAKAN 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03852 190 Gene3D - 155 185 - -
Aip03g03852 190 PANTHER GLUTAMATE RECEPTOR 3.4 22 186 - -
Aip03g03852 190 Gene3D - 42 154 - -
Aip03g03852 190 SUPERFAMILY Periplasmic binding protein-like I 35 184 IPR028082 -
Aip03g03852 190 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 22 186 - -
Aip03g03852 190 Pfam Receptor family ligand binding region 58 184 IPR001828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03852 Aip-Chr3 121118939 121119761 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03852 18 184 Ion Channels AT2G29120 31.579 5.68e-22 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03852 - - gmx:100776933 236.498