Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03829 ATGACATGGTGCAATAGATCATCAGTTGTGGAGGGGGGAATCGAAATAATCAACCACCCCAATCTCAATATTATTGCAATCCCTAGAAATAGTAATGACAATAATAATAGTGTTATTAGTGTTAATCACGCAAATACTCCTCCTAAACCAACCGAAATCCGAGCCGTTACTTGCCCCTCTTGTGGTCATCACATTCAAATACAACAAGATCAGGGTGGGGGAATTCAAGACTTGCCAGGATTGCCAGCTGGAGTGAAATTTGATCCGAATGACCAAGAGATACTGGAGCATTTGGATGCAAAAGTGCAGTCTGATGTGAGAAAGCTTCATCCTCTAATTGATGAGTTCATACCAACTCTTGAGGGCGAGAATGGAATTTGCTATACTCACCCAGAGAAGCTTCCAGGAGTAAGCAAAGATGGACAAGTGCGTCACTTCTTTCACAGGCCTTCAAAAGCATACACAACGGGAACAAGGAAGAGAAGAAAGGTTCACACCGACCAAGAAGGAAGCGAGACTAGGTGGCACAAAACTGGCAAAACCAGACCCATCTCTGTGGCTGGTTCCGTTAAGGGTTTCAAGAAGATTCTTGTTCTCTACACCAACTATGGCAGGCAGAAGAAGCCCGAGAAGACCAACTGGGTCATGCATCAGTACCATCTCGGCTCCAACGAAGAAGAGAAAGACGGCGAACTCGTCGTTTCTAAGGTTTTCTATCAAACACAACCTCGACAGTGTGCAAACAAGGATCCTTATGATGAAAGATTATTGATGACTTCACAAATTAACAGTGTCAATGACATTAGCATTCACGCACTACCCAAGAACAACAACAACAACAATGCAGGTTTTGTGGATTATTATAACCCCGGTTTCATGAATATGAATTATGAACAGATGAACGAGACTACCTCACCGCAACTGATTCCGAATATGGTGGTGCAAGGTGACAGCTCTTCTTTCATTCGGTTACCCAGGTTGGACAGAAAGTAG 993 0.435 MTWCNRSSVVEGGIEIINHPNLNIIAIPRNSNDNNNSVISVNHANTPPKPTEIRAVTCPSCGHHIQIQQDQGGGIQDLPGLPAGVKFDPNDQEILEHLDAKVQSDVRKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGTRKRRKVHTDQEGSETRWHKTGKTRPISVAGSVKGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGSNEEEKDGELVVSKVFYQTQPRQCANKDPYDERLLMTSQINSVNDISIHALPKNNNNNNAGFVDYYNPGFMNMNYEQMNETTSPQLIPNMVVQGDSSSFIRLPRLDRK 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03829 330 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 320 IPR044799 GO:0003700
Aip03g03829 330 MobiDBLite consensus disorder prediction 154 181 - -
Aip03g03829 330 PANTHER NAC DOMAIN-CONTAINING PROTEIN 10 1 320 - -
Aip03g03829 330 ProSiteProfiles NAC domain profile. 81 240 IPR003441 GO:0003677|GO:0006355
Aip03g03829 330 Gene3D NAC domain 90 244 IPR036093 GO:0003677|GO:0006355
Aip03g03829 330 MobiDBLite consensus disorder prediction 160 179 - -
Aip03g03829 330 Pfam No apical meristem (NAM) protein 82 221 IPR003441 GO:0003677|GO:0006355
Aip03g03829 330 SUPERFAMILY NAC domain 76 240 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03829 Aip-Chr3 120738162 120741791 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03829 1 324 NAC Transcription Factor Family AT1G28470 57.704 2.48e-119 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aip03g03829 NAM 5.5e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03829 - - adu:107480763 623.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03829 03 120738162 120741791 Aip03g03829 03 120738162 120741791 ECH
Aip10g00401 10 4026094 4028463 Aip03g03829 03 120738162 120741791 ECH