Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03828 ATGCTTCATCTGCTTGTGTGCATGCTCTGCATTCTCCTCTCCCCAGTGACCTCCCTCAACCAAGAAGGCCTCTACCTCCAACAATTCAAGCTAACCCTCGACGACCCCGACAATCGCCTCGCCGACTGGAACCCCCGCCATGCCACCCCTTGCAACTGGTTTGGCGTCCTCTGCGACCCCCCTACCAACACCACCGTCACCTCCCTCTCCCTCCCCGACACTAACATCGCCGGTCCATTCTCCGCCCATATCCTCTGCCGCCTCCCCAACCTCTCCTCCATCAACCTCTTCAACAACTCCATCAACGCCACCCTCCCCCTCGACATCTCCCTCTGCTCCAACCTCCAACACCTCGACCTCTCCCAGAACCTTCTCACCGGCACGCTCCCCCACACTCTCCCTCACCTCCCCAACCTCCGCTACCTCGACCTCACCGGCAACAACTTCTCCGGCCCCATTCCGGACTCCTTCGGGACCTTCCAGAAACTCGAGGTCATCTCCCTCGTTTACAACCTTCTAGAAGGCACCATCCCTCCCTCATTGGGGAACCTAACCACCCTCAAAATGCTCAACCTCTCTTACAACCCATTCTACCCGGGTCGGATCCCGGACTCGCTCGGCAACCTCACCAACCTCGAGGTTCTCTGGCTCACACAGTGCAACCTCGTTGGCACCATTCCAGACTCGCTTGGCAACTTGAAGAACCTCAGGGACTTGGACCTTGCGCTCAACGATTTGTACGGTTCCATCCCCACTTCCCTCACTCGTTTGACTCGTTTGACTCAGATTGAGTTGTACAACAACTCGCTCTCCGGGGACCTGCCTCGTGGCTGGAGAAACCTCACCGCCCTACGCCTTCTCGACGCCTCCATGAACCACTTGACGGGGACCATACCGGAGGAGCTCTGCGCGTTGCCCTTGGAGAGTCTCAACCTCTACGAGAACCGCTTTGAGGGCCAGCTGCCGCCGAGCATTGCCAATTCGCCCAACCTCTACGAGCTCAGGATCTTCGGGAACCGTCTCACCGGAAGGTTGCCGGAGAATCTGGGGCGCCATTCTCCTCTCAGGTGGCTCGACGTCTCCAGCAACCAGTTCTTGGGGCCGATTCCGTCCACGCTGTGCGATCACGGGGAACTGGAGGAGCTTCTTGTGATATACAATTTGTTTTCCGGCGAGATTCCGGCGAGTCTGGGAACGTGCCAGAGCCTGACGCGGGTGAGGCTGGGGAACAACCGGTTCTCCGGCGAGGTGCCGGCGGGGATGTGGGGTCTCCCCCACGTGTACCTTCTTGAACTCGCGGAGAATTCGTTCTCCGGCCCCATTGCGAAGACCATTGCCGGTGCCGGGAACCTTTCGCTGCTGTTTCTCTCGAAGAATAAGTTCGAGGGAGTGATCCCCGACGAGGTTGGGTGGTTGGACAATCTCGTGGAATTTTCTGGCAACGATAACATGTTCAGCGGTTCGATCCCAGAGACTGTTGTGAATCTCGGGCAGCTTGGGACCCTTGATCTTCACAACAACAAACTATCCGGGGAGCTTCCAAAAGGGCTTCATTCTTTGAAAAAGCTGAGCGTTTTGAATTTGGCCAACAATGGCATTGGTGGGAAGATTCCAGATGAGATTGGTAGCTTGTCAGTTTTGAATTCTCTTGATCTCTCCAAGAACCAGTTCTCCGGGATGGTCCCTCACGGATTGCAGAATTTGAAGCTGAACATTCTGAATTTGTCTTACAATCGTCTCTCCGGGGAGCTCCCTCCTCTGTTGGCTAAGGACGTGTACGTGGATAGCTTTCTGGGGAACCCCGGTTTGTGTGGGGATTTGAAGGGTCTCTGCAGTGGAAGAGGCCAAGCCAAGAGTTTGGGCTATGTTTGGCTTCTCAGGACTATCTTCATTGTCGCCACTTTGGTGTTCTTTGTGGGCGTGGTGTGGTTCTACCTCAAGTATAAGACTTTCAAGGATGCCAGAAGGTCCATTGATAAATCGAGGTGGACCTTGATGTCGTTTCATAAGCTGGGTTTTGGTGAAGATGAGATCTTGAATTGCCTTGATGAGGATAATGTGATTGGAAGTGGGTCATCCGGGAGAGTCTACAAGGTGGTGCTTAGCAGCGGGGAAGCGGTTGCGGTGAAGAAGATATGGGGAGGGGCAGGGAAGGGTGGAGAGAGTGGAGATGTGGAAAAAGGTGGTGGTGGACGGGTGCAGGACGAAGCTTTTGATGCGGAGGTTGAGACTTTGGGCAAGATCAGGCACAAGAACATTGTTAAGCTGTGGTGTTGCTGCACAACCAGGGATTGCAAGCTACTGGTTTATGAGTACATGCCCAATGGTAGTCTTGGTGATTTGTTGCATAGCAGCAAAGGTGGGTTGTTGGATTGGCCAACCAGGTATAAGATTGCCGTTGACGCTGCTGAAGGCCTCTCTTATCTACATCATGATTGTGTTCCACCAATTGTTCATAGAGATGTGAAATCCAGCAATATCTTGTTGGATGGGGACTATGGTGCCAGGGTGGCGGATTTTGGAGTGGCCAAGGCCGTCGAAACTGGAGGGAAAGGAGGAACCAAATCCATGTCTGTCATAGCTGGGTCTTGTGGGTACATTGCGCCAGAATATGCATACACTCTCAGAGTGAACGAGAAAAGCGACATATACAGTTTTGGTGTTGTGATACTTGAGTTGGTTACCGGGAGGCGTCCGGTGGATCCTGAATTCGGAGAGAAGGACTTGGTGAAGTGGGTGTGCACCACCCTGGATCAGAAAGGGGTGGACCATTTAATTGACTCGAGGCTTGATTCTTGTTTCAAAGACGAAATTTCCAAGATGTTGCAAGAGGTGGCAACAGAGAAACAAGTGAAGCCTGCCAAGAAAGATGGCAAGTTAACTCCTTATTACTATGATGATGCCTCGGATCACGGAAGTGTTGCTTGA 2928 0.5338 MLHLLVCMLCILLSPVTSLNQEGLYLQQFKLTLDDPDNRLADWNPRHATPCNWFGVLCDPPTNTTVTSLSLPDTNIAGPFSAHILCRLPNLSSINLFNNSINATLPLDISLCSNLQHLDLSQNLLTGTLPHTLPHLPNLRYLDLTGNNFSGPIPDSFGTFQKLEVISLVYNLLEGTIPPSLGNLTTLKMLNLSYNPFYPGRIPDSLGNLTNLEVLWLTQCNLVGTIPDSLGNLKNLRDLDLALNDLYGSIPTSLTRLTRLTQIELYNNSLSGDLPRGWRNLTALRLLDASMNHLTGTIPEELCALPLESLNLYENRFEGQLPPSIANSPNLYELRIFGNRLTGRLPENLGRHSPLRWLDVSSNQFLGPIPSTLCDHGELEELLVIYNLFSGEIPASLGTCQSLTRVRLGNNRFSGEVPAGMWGLPHVYLLELAENSFSGPIAKTIAGAGNLSLLFLSKNKFEGVIPDEVGWLDNLVEFSGNDNMFSGSIPETVVNLGQLGTLDLHNNKLSGELPKGLHSLKKLSVLNLANNGIGGKIPDEIGSLSVLNSLDLSKNQFSGMVPHGLQNLKLNILNLSYNRLSGELPPLLAKDVYVDSFLGNPGLCGDLKGLCSGRGQAKSLGYVWLLRTIFIVATLVFFVGVVWFYLKYKTFKDARRSIDKSRWTLMSFHKLGFGEDEILNCLDEDNVIGSGSSGRVYKVVLSSGEAVAVKKIWGGAGKGGESGDVEKGGGGRVQDEAFDAEVETLGKIRHKNIVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSSKGGLLDWPTRYKIAVDAAEGLSYLHHDCVPPIVHRDVKSSNILLDGDYGARVADFGVAKAVETGGKGGTKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRRPVDPEFGEKDLVKWVCTTLDQKGVDHLIDSRLDSCFKDEISKMLQEVATEKQVKPAKKDGKLTPYYYDDASDHGSVA 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03828 975 PANTHER LRR RECEPTOR-LIKE KINASE 5 942 - -
Aip03g03828 975 ProSitePatterns Protein kinases ATP-binding region signature. 688 711 IPR017441 GO:0005524
Aip03g03828 975 SUPERFAMILY L domain-like 161 418 - -
Aip03g03828 975 Pfam Protein kinase domain 684 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g03828 975 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 5 942 - -
Aip03g03828 975 Pfam Leucine rich repeat 89 149 IPR001611 GO:0005515
Aip03g03828 975 SMART LRR_typ_2 184 209 IPR003591 -
Aip03g03828 975 SMART LRR_typ_2 520 543 IPR003591 -
Aip03g03828 975 SMART LRR_typ_2 233 257 IPR003591 -
Aip03g03828 975 SMART LRR_typ_2 136 159 IPR003591 -
Aip03g03828 975 SMART LRR_typ_2 281 305 IPR003591 -
Aip03g03828 975 SMART LRR_typ_2 544 567 IPR003591 -
Aip03g03828 975 SMART LRR_typ_2 496 519 IPR003591 -
Aip03g03828 975 SMART LRR_typ_2 88 112 IPR003591 -
Aip03g03828 975 SUPERFAMILY L domain-like 20 197 - -
Aip03g03828 975 Gene3D Transferase(Phosphotransferase) domain 1 773 956 - -
Aip03g03828 975 Pfam Leucine rich repeat N-terminal domain 20 59 IPR013210 -
Aip03g03828 975 Pfam Leucine Rich Repeat 211 233 IPR001611 GO:0005515
Aip03g03828 975 ProSiteProfiles Protein kinase domain profile. 682 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g03828 975 Gene3D Ribonuclease Inhibitor 307 613 IPR032675 -
Aip03g03828 975 SMART serkin_6 682 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g03828 975 ProSitePatterns Serine/Threonine protein kinases active-site signature. 817 829 IPR008271 GO:0004672|GO:0006468
Aip03g03828 975 Gene3D Phosphorylase Kinase; domain 1 667 772 - -
Aip03g03828 975 SUPERFAMILY Protein kinase-like (PK-like) 678 943 IPR011009 -
Aip03g03828 975 SUPERFAMILY L domain-like 379 603 - -
Aip03g03828 975 Gene3D Ribonuclease Inhibitor 19 176 IPR032675 -
Aip03g03828 975 Gene3D Ribonuclease Inhibitor 177 278 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03828 Aip-Chr3 120716325 120720310 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03828 16 975 Receptor kinase-like Gene Family AT1G28440 67.814 0.0 1329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aip03g03828 Pkinase 5.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03828 - - gmx:100819887 1583.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03828 03 120716325 120720310 Aip03g03828 03 120716325 120720310 ECH
Aip10g00403 10 4039520 4043151 Aip03g03828 03 120716325 120720310 ECH