Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03826 ATGGAGTCGCGAGTGTTGTCACGTGCCGCCACCTCCCTCCCCCACCTCCGCAGGCTACCGCGCCGTGAATCCGCCGCCAATGCATCCTTTGTGCCAGCTGTGAAGGCGATCGGCTCCGTGGCTGACGGTGGGAATCTCATATGGGGGAGACAGCTGCGCCCGGAGCTGTTGTCGCCGGTGCTGAAGAAAGAGGGGCCTGCCGTGCTTCTTCGGCCGTGTCTGGCCGCCGCCTCCTCGCCGGCCGAGGGGAGTGATTCCGCCGGGGAAGCGAAGGTTGGGTTCTTCGACAAGTACCCAGCACTTGTAACCGGGTTTTTCTTCTTCATGTGGTACTTCTTGAATGTGATTTTCAACATCCTCAACAAGAAGATCTACAATTACTTCCCCTACCCATACTTCGTGTCGGTTATTCATTTGTTCGTGGGTGTGGTGTACTGTTTGGTGAGCTGGACCGTGGGCCTTCCTAAGCGCGCTCCTATGGACTCGAACCTGCTCAAGTTGTTGATCCCTGTGGCCGTGTGTCACGCATTAGGCCACGTTACCAGCAATGTCTCATTTGCAGCGGTGGCTGTTTCGTTCACACATACCATTAAAGCTCTTGAGCCATTCTTCAATGCTGCTGCTTCACAGTTCATACTTGGCCAATCAATACCAATTACTCTCTGGCTCTCACTGGCTCCCGTTGTTATTGGTGTCTCAATGGCGTCATTGACCGAACTCTCATTCAACTGGACCGGATTCATCAGTGCAATGATTTCAAACATTTCCTTTACATACCGGAGTATCTATTCCAAGAAAGCCATGACTGATATGGACAGTACTAATATCTACGCCTACATTTCCATCATTGCTCTAATTGTCTGCATACCACCCGCTGTTATTCTGGAAGGGCCTGCACTGATGAAGCATGGATTTAATGATGCAATTGCTAAAGTAGGATTGGTCAAGTTCGTCTCAGACCTCTTCTGGGTTGGTATGTTTTATCACCTCTACAATCAGGTGGCCACCAACACACTGGAGAGAGTGGCACCTCTCACTCATGCAGTTGGCAACGTACTCAAACGTGTATTTGTTATTGGATTTTCAATCATTGTCTTTGGTAACAAGATTTCAACCCAAACTGGCATAGGAACATGCATTGCAATTGCTGGAGTTGCACTCTACTCGTTCATCAAAGCCAGGATGGAGGAAGAGAAGAGACAAGCAAAAGCAGCATAA 1218 0.4992 MESRVLSRAATSLPHLRRLPRRESAANASFVPAVKAIGSVADGGNLIWGRQLRPELLSPVLKKEGPAVLLRPCLAAASSPAEGSDSAGEAKVGFFDKYPALVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLVSWTVGLPKRAPMDSNLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPITLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALIVCIPPAVILEGPALMKHGFNDAIAKVGLVKFVSDLFWVGMFYHLYNQVATNTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTGIGTCIAIAGVALYSFIKARMEEEKRQAKAA 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03826 405 Pfam Triose-phosphate Transporter family 102 389 IPR004853 -
Aip03g03826 405 SUPERFAMILY Multidrug resistance efflux transporter EmrE 144 238 - -
Aip03g03826 405 SUPERFAMILY Multidrug resistance efflux transporter EmrE 321 390 - -
Aip03g03826 405 PANTHER BNAC02G47130D PROTEIN 20 397 - -
Aip03g03826 405 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 101 399 IPR004696 GO:0016021|GO:0022857|GO:0055085
Aip03g03826 405 PANTHER SOLUTE CARRIER FAMILY 35 20 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03826 Aip-Chr3 120684646 120687725 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03826 1 403 Antiporters AT5G46110 78.345 0.0 641
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03826 K15283 - gmx:732611 730.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03826 03 120684646 120687725 Aip03g03826 03 120684646 120687725 ECH