LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip03g03826	ATGGAGTCGCGAGTGTTGTCACGTGCCGCCACCTCCCTCCCCCACCTCCGCAGGCTACCGCGCCGTGAATCCGCCGCCAATGCATCCTTTGTGCCAGCTGTGAAGGCGATCGGCTCCGTGGCTGACGGTGGGAATCTCATATGGGGGAGACAGCTGCGCCCGGAGCTGTTGTCGCCGGTGCTGAAGAAAGAGGGGCCTGCCGTGCTTCTTCGGCCGTGTCTGGCCGCCGCCTCCTCGCCGGCCGAGGGGAGTGATTCCGCCGGGGAAGCGAAGGTTGGGTTCTTCGACAAGTACCCAGCACTTGTAACCGGGTTTTTCTTCTTCATGTGGTACTTCTTGAATGTGATTTTCAACATCCTCAACAAGAAGATCTACAATTACTTCCCCTACCCATACTTCGTGTCGGTTATTCATTTGTTCGTGGGTGTGGTGTACTGTTTGGTGAGCTGGACCGTGGGCCTTCCTAAGCGCGCTCCTATGGACTCGAACCTGCTCAAGTTGTTGATCCCTGTGGCCGTGTGTCACGCATTAGGCCACGTTACCAGCAATGTCTCATTTGCAGCGGTGGCTGTTTCGTTCACACATACCATTAAAGCTCTTGAGCCATTCTTCAATGCTGCTGCTTCACAGTTCATACTTGGCCAATCAATACCAATTACTCTCTGGCTCTCACTGGCTCCCGTTGTTATTGGTGTCTCAATGGCGTCATTGACCGAACTCTCATTCAACTGGACCGGATTCATCAGTGCAATGATTTCAAACATTTCCTTTACATACCGGAGTATCTATTCCAAGAAAGCCATGACTGATATGGACAGTACTAATATCTACGCCTACATTTCCATCATTGCTCTAATTGTCTGCATACCACCCGCTGTTATTCTGGAAGGGCCTGCACTGATGAAGCATGGATTTAATGATGCAATTGCTAAAGTAGGATTGGTCAAGTTCGTCTCAGACCTCTTCTGGGTTGGTATGTTTTATCACCTCTACAATCAGGTGGCCACCAACACACTGGAGAGAGTGGCACCTCTCACTCATGCAGTTGGCAACGTACTCAAACGTGTATTTGTTATTGGATTTTCAATCATTGTCTTTGGTAACAAGATTTCAACCCAAACTGGCATAGGAACATGCATTGCAATTGCTGGAGTTGCACTCTACTCGTTCATCAAAGCCAGGATGGAGGAAGAGAAGAGACAAGCAAAAGCAGCATAA	1218	0.4992	MESRVLSRAATSLPHLRRLPRRESAANASFVPAVKAIGSVADGGNLIWGRQLRPELLSPVLKKEGPAVLLRPCLAAASSPAEGSDSAGEAKVGFFDKYPALVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLVSWTVGLPKRAPMDSNLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPITLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALIVCIPPAVILEGPALMKHGFNDAIAKVGLVKFVSDLFWVGMFYHLYNQVATNTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTGIGTCIAIAGVALYSFIKARMEEEKRQAKAA	405

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Aip03g03826	405	Pfam	Triose-phosphate Transporter family	102	389	IPR004853	-
Aip03g03826	405	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	144	238	-	-
Aip03g03826	405	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	321	390	-	-
Aip03g03826	405	PANTHER	BNAC02G47130D PROTEIN	20	397	-	-
Aip03g03826	405	TIGRFAM	tpt: Tpt phosphate/phosphoenolpyruvate translocator	101	399	IPR004696	GO:0016021\|GO:0022857\|GO:0055085
Aip03g03826	405	PANTHER	SOLUTE CARRIER FAMILY 35	20	397	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip03g03826	Aip-Chr3	120684646	120687725	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aip03g03826	1	403	Antiporters	AT5G46110	78.345	0.0	641

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip03g03826	K15283		-	gmx:732611	730.709

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aip03g03826	03	120684646	120687725	Aip03g03826	03	120684646	120687725	ECH

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