Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03806 ATGGAGGAGATTTCAACTTCAACCACAACTTCAACTTCAGCTTCAGGGTACAAGGAATATGTGGCAGGTTTGATCGCTGGCGTTGCCACTGTTGCCATTGGCCATCCATTTGACACCGTCAAGGTGAAACTGCAAAAGCACAACACAGGACAACATGTGGTTCGCTATAGAAGTGGATTGCATTGCACCACTAGGATATTGAAGACTGAAGGAATCAAAGGACTATATAGAGGAGCAACATCATCTTTTCTCGGGATGGCTTTTGAAAGTTCACTTCTTTTTGGCATATATTCCCAGACAAAATTGGCCCTTCAGGGAGGTGTTCAAAGTGGTGAACCGCAGCCTCAAGTGATAATACCATCTGCAGCTTATGGTGGTGCCATCATCAGTTTTGTGTTATGTCCGACGGAGCTGGTAAAGTGTAGGATGCAGATTCAAGGGACTGACTCTTTGGTTCCGAAGTCCAGTAGATACAGTAGTCCTCTTGATTGTGCCCTTAAAACCGTGAAAAGTGAAGGGGTGACAGGAATTTTTCGTGGAGGCTTTACAACATTGCTTAGAGAATCAATAGGGAATGCTGTCTTTTTCAGCACATATGAATATGTACGCTATCACCTGCATTCACATGCCAAAGCTGTTCGTTCCAATTACAATAACCTGGTTGATATTGGAATTGGGATAATTACCGGAGGTCTTGGTGGTGTGTCTTTTTGGTTGGCGGTTCTGCCCCTTGATGTAGCAAAGACTTTAATTCAGACAAACCCGGAAAAAAACTGTTCACGAAATCCTTTTCAGGTGCTGAGTTTGGTTTACAGGAGCGGTGGATTGAAGGGGTGTTATACAGGTCTGGGGCCTACAGTAACCCGAGCATTTCCTGCTAATGCAGCAGCAATTGTGACCTGGGAGCTAGCAATGAAAATGTTAGGCATTAGGCACGACTGA 942 0.4459 MEEISTSTTTSTSASGYKEYVAGLIAGVATVAIGHPFDTVKVKLQKHNTGQHVVRYRSGLHCTTRILKTEGIKGLYRGATSSFLGMAFESSLLFGIYSQTKLALQGGVQSGEPQPQVIIPSAAYGGAIISFVLCPTELVKCRMQIQGTDSLVPKSSRYSSPLDCALKTVKSEGVTGIFRGGFTTLLRESIGNAVFFSTYEYVRYHLHSHAKAVRSNYNNLVDIGIGIITGGLGGVSFWLAVLPLDVAKTLIQTNPEKNCSRNPFQVLSLVYRSGGLKGCYTGLGPTVTRAFPANAAAIVTWELAMKMLGIRHD 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03806 313 PANTHER - 13 140 - -
Aip03g03806 313 PANTHER - 141 312 - -
Aip03g03806 313 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 141 312 - -
Aip03g03806 313 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 13 140 - -
Aip03g03806 313 Pfam Mitochondrial carrier protein 121 207 IPR018108 -
Aip03g03806 313 Pfam Mitochondrial carrier protein 17 105 IPR018108 -
Aip03g03806 313 Pfam Mitochondrial carrier protein 227 308 IPR018108 -
Aip03g03806 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 113 205 IPR018108 -
Aip03g03806 313 Gene3D Mitochondrial carrier domain 20 311 IPR023395 -
Aip03g03806 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 14 103 IPR018108 -
Aip03g03806 313 SUPERFAMILY Mitochondrial carrier 16 302 IPR023395 -
Aip03g03806 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 221 307 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03806 Aip-Chr3 120423397 120427842 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03806 34 308 Antiporters AT1G79900 29.643 5.76e-34 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03806 K15109 - qsu:112032455 496.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03806 03 120423397 120427842 Aip03g03806 03 120423397 120427842 ECH