Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03805 ATGGACACTAGCAGGGCTGAAGGGAAGAGAACCTTGCTGAGGTACAAAGAGGAGGAGGAGGACGACGACGAGGAGGAGACTGAGGAGGAAGAGGAAGAAGACACGGTGGGTTATGGAGAAGAATATGGTGGTGGTGGGAGGAGGAAGAGGGCAATGACAGATCTCATGAGCAGCAAGAGAGGCTTCAAAGGTGGAGGAGGCTCGTCAATGGCACCGTCATGTCAGGTGGACGGCTGTGACTCTGATCTGAGCGAGGCAAAGCAGTATCATCGAAGACATAAGGTTTGTGAGTTCCATGCCAAGGCTCCTTCCGTACACATTTCAGGCCAACAACAAAGGTTTTGCCAACAATGCAGCAGATTTCATGAGCTTTCGGAGTTTGATGACTCAAAACGAAGCTGTAGGAGACGGTTGGCGGGTCATAATGAGAGGCGTCGCAAAAATGCAACTGAGTACCATGGAGAATGA 468 0.5085 MDTSRAEGKRTLLRYKEEEEDDDEEETEEEEEEDTVGYGEEYGGGGRRKRAMTDLMSSKRGFKGGGGSSMAPSCQVDGCDSDLSEAKQYHRRHKVCEFHAKAPSVHISGQQQRFCQQCSRFHELSEFDDSKRSCRRRLAGHNERRRKNATEYHGE 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03805 155 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 3 18 150 - -
Aip03g03805 155 PIRSF SBP 2 155 IPR017238 GO:0003677|GO:0003700|GO:0009908
Aip03g03805 155 Coils Coil 13 35 - -
Aip03g03805 155 Pfam SBP domain 74 147 IPR004333 GO:0003677
Aip03g03805 155 Gene3D - 64 135 IPR036893 GO:0003677|GO:0005634
Aip03g03805 155 ProSiteProfiles Zinc finger SBP-type profile. 71 148 IPR004333 GO:0003677
Aip03g03805 155 SUPERFAMILY SBT domain 72 152 IPR036893 GO:0003677|GO:0005634
Aip03g03805 155 MobiDBLite consensus disorder prediction 1 17 - -
Aip03g03805 155 MobiDBLite consensus disorder prediction 1 50 - -
Aip03g03805 155 MobiDBLite consensus disorder prediction 18 38 - -
Aip03g03805 155 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 18 150 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03805 Aip-Chr3 120412750 120414482 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03805 65 151 SBP-box Gene Family AT2G33810 71.264 3.23e-43 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Aip03g03805 SBP 1.6e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03805 - - aip:107631217 256.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03805 03 120412750 120414482 Aip03g03805 03 120412750 120414482 ECH
Aip10g00428 10 4231387 4232909 Aip03g03805 03 120412750 120414482 ECH
Aip08g01478 08 24796655 24797858 Aip03g03805 03 120412750 120414482 ECH
Aip08g00936 08 10854096 10855075 Aip03g03805 03 120412750 120414482 ECH
Aip03g03805 03 120412750 120414482 Aip10g00428 10 4231387 4232909 PCT