Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03797 ATGGATGAAGATAGCAGCAGCTCTTGGATAAGGAGGGCTAAGTTCTCTCACACAGTTTGTCACCGATTGGAGTATTCCAGATTGGGCTCTTTTCCTAACAGCATTCAGCGGCAGCAGAACTCAGGGACTCTGAAATCAAGGCCCGCAGCAGCACAACCAGCGCCGGCGCCGGCTGTGGCACCTGCAGTTCCTTATAATCCAAACTCTGTATCTAACATGTCACAGGTTCAGAGAAATCCAATAACGAATAGGCAGAGATCTTTGTCCCCTTTGCCGGTAACTCTTCTTTCCGATGCGTTTAAGGAAGCCCAGCATGAGAAGAAGAGGTTCTCAACTCCAACCACTCCTCGGAGGAAAGACCAGGAGAAGAGAATTATGGGGAAGTTAATGAACCAGGACTCTAAGCACTGTAGAGACACTAAGGTGTTGTCAAATTCAAAATCGCCTCAGGGTAGTCCAATTGGGCAACTTGCATCAATGAAATTGGGAGAGAAGTCAAAGCACCGCAAGGAATCTGCGTGGACAAAGTACTTTGACCATGGTGGAGGAAGGGTCACTGCTGTGGAAACAGCTGAAGAGTGGACTGTGGACCTCTCTAAGCTGTTCCTTGGTGTCAGATTCGCTTATGGGGCTCACAGTCGGCTTTACCATGGTATGTATAACGAAGAGCCTGTTGCTGTGAAGATTATCCGCGTGCCAGATGACGACGAAAATGGAAACATGGCTTATCGGTTGGAGAATCAGTTCATTAGAGAGGTCTCGCTTTTGTCTCGCCTCCATCATCAGAATGTTATAAAGTTTGTAGCAGCGTGCAGAAAACCACCTGTTTATTGTGTTATCACTGAATATCTAGCAGAAGGTTCCTTAAGAGCATATTTGCATAAATTGGAGAAAAAGACTATTTCTATGCAGAAACTAATTGCTTTTGCTCTGGATATTGCGCGCGGGATGGAATATATACACTCTCAAGGTGTCATTCATAGAGACCTTAAACCAGAGAATGTACTTATTAGCGAAGACTTTCACCTTAAAATTGCTGATTTTGGGATTGCTTGTGAGGAAGCATATTGTGACTTATTAGCTGACGACCCTGGTACGTACCGCTGGATGGCACCTGAGATGATCAAACGTAAATCCTACGGGAGAAAGGTTGATGTATATAGTTTTGGGCTTATCCTGTGGGAAATGGTAACCGGAACAATACCATATGAGGATATGACTCCCATCCAGGCTGCTTTTGCAGTGGTAAATAAGAATTCAAGGCCTGTTATTCCTTCCGATTGCCCACCTGCAATGCGCGCTTTAATCGAGCAATGTTGGTCCGTGCATCCAGACAAGAGGCCTGAGTTCTGGCAGGTTGTTAAGGTGTTAGAACAATTCGAATCATCACTTGCATTGGACGGAACCTTGACTCTGGTGCAAAACCCTTTGTGCCAGGATCATAAGAAAGGGCTTCTTCATTGGATTCAAAAACTTAGTCCTTCTCATCAAAATAGTGGTCCGGCACTTAAACCTAGATTCTCATGA 1527 0.4519 MDEDSSSSWIRRAKFSHTVCHRLEYSRLGSFPNSIQRQQNSGTLKSRPAAAQPAPAPAVAPAVPYNPNSVSNMSQVQRNPITNRQRSLSPLPVTLLSDAFKEAQHEKKRFSTPTTPRRKDQEKRIMGKLMNQDSKHCRDTKVLSNSKSPQGSPIGQLASMKLGEKSKHRKESAWTKYFDHGGGRVTAVETAEEWTVDLSKLFLGVRFAYGAHSRLYHGMYNEEPVAVKIIRVPDDDENGNMAYRLENQFIREVSLLSRLHHQNVIKFVAACRKPPVYCVITEYLAEGSLRAYLHKLEKKTISMQKLIAFALDIARGMEYIHSQGVIHRDLKPENVLISEDFHLKIADFGIACEEAYCDLLADDPGTYRWMAPEMIKRKSYGRKVDVYSFGLILWEMVTGTIPYEDMTPIQAAFAVVNKNSRPVIPSDCPPAMRALIEQCWSVHPDKRPEFWQVVKVLEQFESSLALDGTLTLVQNPLCQDHKKGLLHWIQKLSPSHQNSGPALKPRFS 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03797 508 Gene3D Phosphorylase Kinase; domain 1 189 284 - -
Aip03g03797 508 SMART serkin_6 201 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g03797 508 Pfam Protein tyrosine and serine/threonine kinase 209 457 IPR001245 GO:0004672|GO:0006468
Aip03g03797 508 ProSitePatterns Serine/Threonine protein kinases active-site signature. 325 337 IPR008271 GO:0004672|GO:0006468
Aip03g03797 508 PRINTS Tyrosine kinase catalytic domain signature 281 294 IPR001245 GO:0004672|GO:0006468
Aip03g03797 508 PRINTS Tyrosine kinase catalytic domain signature 319 337 IPR001245 GO:0004672|GO:0006468
Aip03g03797 508 PRINTS Tyrosine kinase catalytic domain signature 365 375 IPR001245 GO:0004672|GO:0006468
Aip03g03797 508 PRINTS Tyrosine kinase catalytic domain signature 384 406 IPR001245 GO:0004672|GO:0006468
Aip03g03797 508 PRINTS Tyrosine kinase catalytic domain signature 428 450 IPR001245 GO:0004672|GO:0006468
Aip03g03797 508 SUPERFAMILY Protein kinase-like (PK-like) 184 457 IPR011009 -
Aip03g03797 508 MobiDBLite consensus disorder prediction 33 47 - -
Aip03g03797 508 MobiDBLite consensus disorder prediction 102 142 - -
Aip03g03797 508 Gene3D Transferase(Phosphotransferase) domain 1 285 483 - -
Aip03g03797 508 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 4 484 - -
Aip03g03797 508 MobiDBLite consensus disorder prediction 33 73 - -
Aip03g03797 508 CDD STKc_MAP3K-like 210 457 - -
Aip03g03797 508 MobiDBLite consensus disorder prediction 102 156 - -
Aip03g03797 508 PANTHER TYROSINE KINASE FAMILY PROTEIN 4 484 - -
Aip03g03797 508 ProSiteProfiles Protein kinase domain profile. 201 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03797 Aip-Chr3 120277913 120281937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03797 1 496 MAP Kinase Kinase Kinase AT5G58950 58.627 0.0 602
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Aip03g03797 PK_Tyr_Ser-Thr 1.4e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03797 - - gmx:100784454 784.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03797 03 120277913 120281937 Aip10g00445 10 4382945 4385381 PCT