Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03786 ATGATGCAGCTTGATGAAATCAAGACACAGCGAGAAGTAGGAGAAGACGACGATGGCCCGCCACCGGGTTGGCAACCCATCCATACGCCACCGCCACAACCGCCTCCACAGTCACAGTCACGGTCACGGTCACCACCTCGATGTCCATCCAATTTGGGTCAAATAGTTTGTGGGTCTTGCCATCGCCTGCTTGCATATCAGCGAGGTGCCAAACATGTCCAATGTGTGAGCTGTCAGACAGTTAACATTGTTGGACAAGTTAAGTGTGGGGGCTGTGCAGTATTGCTAATGTACCCATATGGTGCTCCACAAGTTAGGTGTTCCTCATGTCGATTTGTGACAGAAATTGGGGCACACAACAAGCGACCTCCATGGTCTGAACAACAAAGGAAACCAACCCTACCTAAAACTGCTTTTCTACTACTCAGACTGAAAGGCCTACAGAAAACAGATGGCTTTTACAAGAGCTATACGGTTTAA 480 0.4875 MMQLDEIKTQREVGEDDDGPPPGWQPIHTPPPQPPPQSQSRSRSPPRCPSNLGQIVCGSCHRLLAYQRGAKHVQCVSCQTVNIVGQVKCGGCAVLLMYPYGAPQVRCSSCRFVTEIGAHNKRPPWSEQQRKPTLPKTAFLLLRLKGLQKTDGFYKSYTV 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03786 159 PANTHER PROTEIN LOL2 30 134 - -
Aip03g03786 159 MobiDBLite consensus disorder prediction 23 42 - -
Aip03g03786 159 MobiDBLite consensus disorder prediction 1 47 - -
Aip03g03786 159 Pfam LSD1 zinc finger 89 113 IPR005735 -
Aip03g03786 159 Pfam LSD1 zinc finger 57 81 IPR005735 -
Aip03g03786 159 PANTHER PROTEIN LSD1 30 134 IPR040319 -
Aip03g03786 159 TIGRFAM LSD1: zinc finger domain, LSD1 subclass 54 84 IPR005735 -
Aip03g03786 159 TIGRFAM LSD1: zinc finger domain, LSD1 subclass 86 114 IPR005735 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-LSD Aip03g03786 zf-LSD1 2.6e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03786 - - gmx:100780865 159.458