Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip03g03768 | ATGGGCACTGCAAGGGGTCTTGCATTTCTTCATGAAGAACTTGTGCCACACATCGTGCACAGAGACATCAAAGCCAGCAACATACTACTCGACACAGACTTTAATCCAAAAATAGGAGATTTTGGGTTGGCTAAATTGTTTCCTGATGACATCACTCATATTAGCACAAGAATTGCTGGAACAACTGGTTACTTGGCGCCTGAATATGCAATTGGTGGCCAGTTAACCCTGAAGGCTGATGTATATAGTTTTGGGGTTCTTATACTTGAAATAGTTAGCGGCAGAAGCAGTTCAAGGACAAACTGGGGAGACTCATACAAACTCCTCTTGGAATGGGCATGGCAACTCCATGAAGAGGGGAAGTTGGTGGAGCTTGTGGATCCAGAAATGGGAGAGTTTCCTGAGGAAGAGGTGATTAGGTACATGAAGGTAGCATTCTTCTGCACACAAGCAGCTGCAAGCAGAAGGCCAATGATGTCACAGGTTGTTGATATGCTGTCCAAGAAAACAAAGCTCAATGAGAAGCAACTCACAGCACCAGGTTTCTTCCAAGACTCAGGAGAGTCCTCTCTAAAGAAGTCTTCTGGTGAGTCCACAAGCTATCAGTTTAGCTCTACCCCTGCCAGTATTACTCAGGTCAACCCCCGGTAA | 651 | 0.4547 | MGTARGLAFLHEELVPHIVHRDIKASNILLDTDFNPKIGDFGLAKLFPDDITHISTRIAGTTGYLAPEYAIGGQLTLKADVYSFGVLILEIVSGRSSSRTNWGDSYKLLLEWAWQLHEEGKLVELVDPEMGEFPEEEVIRYMKVAFFCTQAAASRRPMMSQVVDMLSKKTKLNEKQLTAPGFFQDSGESSLKKSSGESTSYQFSSTPASITQVNPR | 216 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip03g03768 | 216 | MobiDBLite | consensus disorder prediction | 178 | 216 | - | - | |
Aip03g03768 | 216 | ProSiteProfiles | Protein kinase domain profile. | 1 | 183 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aip03g03768 | 216 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 1 | 209 | - | - | |
Aip03g03768 | 216 | SMART | serkin_6 | 3 | 183 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aip03g03768 | 216 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 185 | - | - | |
Aip03g03768 | 216 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 18 | 30 | IPR008271 | GO:0004672|GO:0006468 | |
Aip03g03768 | 216 | SUPERFAMILY | Protein kinase-like (PK-like) | 2 | 198 | IPR011009 | - | |
Aip03g03768 | 216 | Pfam | Protein kinase domain | 3 | 101 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aip03g03768 | 216 | PANTHER | - | 1 | 209 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip03g03768 | Aip-Chr3 | 119965128 | 119969443 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip03g03768 | 1 | 204 | Receptor kinase-like Gene Family | AT1G56120 | 52.153 | 3.19e-66 | 217 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Aip03g03768 | Pkinase | 3.5e-23 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip03g03768 | - | - | gmx:100775344 | 373.629 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aip03g03768 | 03 | 119965128 | 119969443 | Aip10g00476 | 10 | 4745393 | 4748238 | PCT |