Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03768 ATGGGCACTGCAAGGGGTCTTGCATTTCTTCATGAAGAACTTGTGCCACACATCGTGCACAGAGACATCAAAGCCAGCAACATACTACTCGACACAGACTTTAATCCAAAAATAGGAGATTTTGGGTTGGCTAAATTGTTTCCTGATGACATCACTCATATTAGCACAAGAATTGCTGGAACAACTGGTTACTTGGCGCCTGAATATGCAATTGGTGGCCAGTTAACCCTGAAGGCTGATGTATATAGTTTTGGGGTTCTTATACTTGAAATAGTTAGCGGCAGAAGCAGTTCAAGGACAAACTGGGGAGACTCATACAAACTCCTCTTGGAATGGGCATGGCAACTCCATGAAGAGGGGAAGTTGGTGGAGCTTGTGGATCCAGAAATGGGAGAGTTTCCTGAGGAAGAGGTGATTAGGTACATGAAGGTAGCATTCTTCTGCACACAAGCAGCTGCAAGCAGAAGGCCAATGATGTCACAGGTTGTTGATATGCTGTCCAAGAAAACAAAGCTCAATGAGAAGCAACTCACAGCACCAGGTTTCTTCCAAGACTCAGGAGAGTCCTCTCTAAAGAAGTCTTCTGGTGAGTCCACAAGCTATCAGTTTAGCTCTACCCCTGCCAGTATTACTCAGGTCAACCCCCGGTAA 651 0.4547 MGTARGLAFLHEELVPHIVHRDIKASNILLDTDFNPKIGDFGLAKLFPDDITHISTRIAGTTGYLAPEYAIGGQLTLKADVYSFGVLILEIVSGRSSSRTNWGDSYKLLLEWAWQLHEEGKLVELVDPEMGEFPEEEVIRYMKVAFFCTQAAASRRPMMSQVVDMLSKKTKLNEKQLTAPGFFQDSGESSLKKSSGESTSYQFSSTPASITQVNPR 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03768 216 MobiDBLite consensus disorder prediction 178 216 - -
Aip03g03768 216 ProSiteProfiles Protein kinase domain profile. 1 183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g03768 216 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 209 - -
Aip03g03768 216 SMART serkin_6 3 183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g03768 216 Gene3D Transferase(Phosphotransferase) domain 1 1 185 - -
Aip03g03768 216 ProSitePatterns Serine/Threonine protein kinases active-site signature. 18 30 IPR008271 GO:0004672|GO:0006468
Aip03g03768 216 SUPERFAMILY Protein kinase-like (PK-like) 2 198 IPR011009 -
Aip03g03768 216 Pfam Protein kinase domain 3 101 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g03768 216 PANTHER - 1 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03768 Aip-Chr3 119965128 119969443 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03768 1 204 Receptor kinase-like Gene Family AT1G56120 52.153 3.19e-66 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip03g03768 Pkinase 3.5e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03768 - - gmx:100775344 373.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03768 03 119965128 119969443 Aip10g00476 10 4745393 4748238 PCT