Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03745 ATGGTGGTGGAAGAGAGTGGGAATCATAGCGGCAGAGGGAATGGGAATTTGAGCTTGAGTGGCGGTGTCAATGGTGGAGATCAGAAAGGGAAGAAGAAAGGGATGCCGGTGAAGAATCTCATGGCCGAGAGGTGGCACAGGAAGAAGCTTAATGATAGGTTGTACATGTTTAGGTCTATTGTGCCAAAGATTAGCAAGATGGATAGGGCTTCGATACTTGGGGATGCAATCAACTGCTTGAGGGAGTTACTGCAGCAGATTAATGATCTTCACAATGAACTGGAGTCAACTCCACCTGGTTCTTCGCTGCAATCTTCCACCACCATCCTTCAAACTTTAACACCCACGCCGCAAACCCTTCCATGCCAGGGGAAGGAGGAACTGTATCCTGGTGTCTTGCCATGCCCCAACACCAACTTGCAAAGGTGTGGTGCTAGATAG 441 0.4898 MVVEESGNHSGRGNGNLSLSGGVNGGDQKGKKKGMPVKNLMAERWHRKKLNDRLYMFRSIVPKISKMDRASILGDAINCLRELLQQINDLHNELESTPPGSSLQSSTTILQTLTPTPQTLPCQGKEELYPGVLPCPNTNLQRCGAR 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03745 146 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 34 83 IPR011598 GO:0046983
Aip03g03745 146 Coils Coil 77 97 - -
Aip03g03745 146 CDD bHLH_AtAMS_like 38 108 - -
Aip03g03745 146 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 10 142 - -
Aip03g03745 146 MobiDBLite consensus disorder prediction 9 23 - -
Aip03g03745 146 PANTHER BHLH TRANSCRIPTIONAL FACTOR 10 142 - -
Aip03g03745 146 Pfam Helix-loop-helix DNA-binding domain 41 83 IPR011598 GO:0046983
Aip03g03745 146 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 31 98 IPR036638 GO:0046983
Aip03g03745 146 MobiDBLite consensus disorder prediction 1 34 - -
Aip03g03745 146 Gene3D - 28 98 IPR036638 GO:0046983
Aip03g03745 146 SMART finulus 40 89 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03745 Aip-Chr3 119632874 119634487 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03745 35 146 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 69.643 2.03e-45 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aip03g03745 HLH 6.8e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03745 - - ahf:112733441 238.424