Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03742 ATGTCAAATGAAATGGCAAGTGGGACACTAAGCTCTGAATACCAAACATTAATGAAGTCAACAACAGAAGGAAAACGAAACATGTTTATCAAAGCTTATCCACCTGTTACCCTAAAGTTTGAAGATGTTATATATGAAACCAAAACAAGTAAAAGGGATGGCTTGTTTTGCAAGAAAGAGAATAGCTGTAATGAGGATGGTAAACTAATCTTGAAAGGGGTTAGCGGTTCTGTTTTCCCTGGTGAATTATTAGCCATTTTAGGTCCTTCTGGTAGTGGAAAAACAACTCTGATAAATGCATTGGGAGGTAGACTAAAAAATGGAATCACAAAAGGAAGCATAACCTACAATGGCAAGAAGCTCTTGAAATCCATGAAGCGAAACCTTGGATTTGTTCATCAACATGATCTCTTCTATTCTCACCTAACAGTCCATGAGACATTAGTCTTTTCGGCTCTTCTTCGCCTGCCAAACAGCCTCTCCAAACAAGAGAAAATCGCGCACGCTTGCGCGGTTATGGATGAACTTGACCTGAATCATTGTAAGGACACTATAATGGGAGGTCCACTCTTAAGAGGTGTGTCGGGTGGAGAACGGAAAAGGGTCAGCATAGGTCAAGAGTTGTTGACTAATCCTAGTCTTTTGCTTGTTGATGAACCAACTTCAGGGCTTGATTCGACAACTGCTCGGAGAATCGTGCTAATTCTGTGTGATTTGGCTAAATCTGGAAGGACTGTGGTAATGACTATTCATCAACCTTCTAGCAAGCTATTTTACATGTTCCCCAAGATTCTGCTGCTATCAGATGGTAGTACCTTGTACTTTGGGAAAGGAGAACTTGTCATGAATTACTTCTACAGCATTGGTTATGCTCCTTCTGTAGCCATGAATCCTACAGATTTCCTACTTGATCTTGCAAGCGGTATATATGCTGGAAATTTAGAAGATGAAGTTGAAGCTACAAAACAAGTGTTAAAATCAGCATTTGAAAGTAACCTTGCATCTCAAGTAAACATGGAACTCAAAAGCTCCAAGGTACCATTTCATAACACTTCAGGGGATGAAATGCTTGGCCAGTACTGCACAACATGGTGGCAACAATTTACTATATTAATAAACAGAGGTTTCAAAGAAAGGAAGTATGACCAATTTTCAATCCTCATAATCTGTAAAGTTTTGGCAGCATCAACCATTTCAGGCCTTGTTTGGTGGCAGGCCGGAGCTAATCAAACCAAAGACCTGGTGGGACTACTTTTCTACTACACACAAGTTAGTGCATACTTGCCTATGTTAGTGTCAATCTTCACCTTCCCTTGTGATCATGAAATGCTAATGAAGGAAAAATCTTGCTACATGTATAGACTCTCAACTTATGTCATGGCAAACAGTGTTGTTGAACTTCCAGCAGTGCTAGCAATGCCAACCATTTTTGTCACCATTACTTACTGGATGGTGGGGCTAAAACCAAATCCCTTAAATTTCTTCCAAACTCTAGCCATTGTTCTTCTCTATGCTTTGGTGTCACAGGGTATTGGTCTTGCCATTGGTGCAGTTGTGGTGAGTAATCAAAAGTTGGCTTCCAGAGTTGGATCGGTAGTCATGACTTTATATATTCTAATCAATGGCTTCTACGTTCAGCATGTCCCAAGTTTTGTGTCATGGATTAAACACATATCTCATAGCTATTATGGTTATAAGCTATTGTTGGGGTCACAGTTTAAGGATAATGTTACATGCTCAGTTAGAGAACATCAAGTGATTCAGCATGTTGGTCTTGATCATCAAATTTTCTCTGTTTTTGCCTTGGTTGCAATGGTTCTAGTGTACAGGATTATTGCCTATTTTGCTCTCATGATTGTTGTCAAACATAGCTAG 1875 0.3968 MSNEMASGTLSSEYQTLMKSTTEGKRNMFIKAYPPVTLKFEDVIYETKTSKRDGLFCKKENSCNEDGKLILKGVSGSVFPGELLAILGPSGSGKTTLINALGGRLKNGITKGSITYNGKKLLKSMKRNLGFVHQHDLFYSHLTVHETLVFSALLRLPNSLSKQEKIAHACAVMDELDLNHCKDTIMGGPLLRGVSGGERKRVSIGQELLTNPSLLLVDEPTSGLDSTTARRIVLILCDLAKSGRTVVMTIHQPSSKLFYMFPKILLLSDGSTLYFGKGELVMNYFYSIGYAPSVAMNPTDFLLDLASGIYAGNLEDEVEATKQVLKSAFESNLASQVNMELKSSKVPFHNTSGDEMLGQYCTTWWQQFTILINRGFKERKYDQFSILIICKVLAASTISGLVWWQAGANQTKDLVGLLFYYTQVSAYLPMLVSIFTFPCDHEMLMKEKSCYMYRLSTYVMANSVVELPAVLAMPTIFVTITYWMVGLKPNPLNFFQTLAIVLLYALVSQGIGLAIGAVVVSNQKLASRVGSVVMTLYILINGFYVQHVPSFVSWIKHISHSYYGYKLLLGSQFKDNVTCSVREHQVIQHVGLDHQIFSVFALVAMVLVYRIIAYFALMIVVKHS 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03742 624 Pfam ABC-2 type transporter 251 326 IPR043926 GO:0140359
Aip03g03742 624 Pfam ABC-2 type transporter 366 573 IPR013525 GO:0016020|GO:0140359
Aip03g03742 624 Gene3D - 59 287 IPR027417 -
Aip03g03742 624 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 25 621 - -
Aip03g03742 624 ProSitePatterns ABC transporters family signature. 194 208 IPR017871 GO:0005524
Aip03g03742 624 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 25 621 - -
Aip03g03742 624 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 38 294 IPR003439 GO:0005524
Aip03g03742 624 SMART AAA_5 80 271 IPR003593 -
Aip03g03742 624 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 285 IPR027417 -
Aip03g03742 624 CDD ABCG_EPDR 35 276 - -
Aip03g03742 624 Pfam ABC transporter 71 222 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03742 Aip-Chr3 119577581 119579949 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03742 70 255 Calmodulin-binding Proteins AT2G36910 30.412 1.95e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03742 K05681 - gmx:100800295 820.461