Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03740 ATGATCATGGTGGATAATAGCACAGATTCATCATCAGGAGCGGGTGAACAGCATCATCACCCTCAGCTTCCTCCAGGCTTTCGATTCCACCCCACAGACGAAGAACTCGTCGTTCACTACCTTAAAAAGAAAGCTTCTTCTTCACCACTCCCTGTCGCCATCATCGCCGACGTTGATCTCTATAAGTTCGATCCATGGGAGCTCCCAAGTAAGGCAGCGTTTGGGGATCAAGAGTGGTACTTTTTCAGTCCTCGGGATAGGAAGTACCCGAATGGAGCTCGGCCAAACAGGGCGGCTACTTCTGGGTATTGGAAAGCCACCGGAACGGATAAGCCTATTCTGTCTTCTGATGGGAACAAGCAGAAAGTTGGAGTCAAGAAAGCGCTTGTTTTTTATGGTGGCAAGCCTCCCAAAGGCGTCAAAACCAATTGGATTATGCATGAGTATAGGCTCACCGATAACAATAACAATGCTTCTTCTTCTAATTCATCTAAGCCTCCTTCTATCCCTCTTGATCCACTCAAGAAGACTTCTCTCAGGCTTGATGATTGGGTTTTGTGCCGAATATACAAGAAGAGCAACAGCAGTAGTAGCAGCCTTCCAATTCCAAGGCCAGCGTTTTTAATGGATGAAGAGAAGGATCTAATTTCCATGGAGAGCAGCATGGTGCCAACTATGTCAATGTCAAAACCAAGAAGCACTTCAACAACAGGTTGTTATGGACCCATGGCACTTGAAAACGATGACAACTTCTTCGATGGTATATTGGCAGCATCAACCGATCATCACACCATGCAAAATGGGTCTCCAGGGTCCTCATCTTCAAGCAAGAGATTCCATGGTGATCTTAATAATGGAGACAACACCTCCTTCGTTTCTCTTCTTAACCAGCTTCCTCACAACACACCCTTTCACCCAAACTCCATTCTTGGCTCCGTTGGAGACGCCGTCTTGAGGCAACAATTTCAACTTCCAGGCTTAAATTGGAACTAA 993 0.4612 MIMVDNSTDSSSGAGEQHHHPQLPPGFRFHPTDEELVVHYLKKKASSSPLPVAIIADVDLYKFDPWELPSKAAFGDQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILSSDGNKQKVGVKKALVFYGGKPPKGVKTNWIMHEYRLTDNNNNASSSNSSKPPSIPLDPLKKTSLRLDDWVLCRIYKKSNSSSSSLPIPRPAFLMDEEKDLISMESSMVPTMSMSKPRSTSTTGCYGPMALENDDNFFDGILAASTDHHTMQNGSPGSSSSSKRFHGDLNNGDNTSFVSLLNQLPHNTPFHPNSILGSVGDAVLRQQFQLPGLNWN 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03740 330 MobiDBLite consensus disorder prediction 261 282 - -
Aip03g03740 330 MobiDBLite consensus disorder prediction 155 174 - -
Aip03g03740 330 PANTHER NAC TRANSCRIPTION FACTOR 56 6 276 - -
Aip03g03740 330 Pfam No apical meristem (NAM) protein 24 151 IPR003441 GO:0003677|GO:0006355
Aip03g03740 330 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 6 276 - -
Aip03g03740 330 Gene3D NAC domain 32 197 IPR036093 GO:0003677|GO:0006355
Aip03g03740 330 MobiDBLite consensus disorder prediction 1 17 - -
Aip03g03740 330 ProSiteProfiles NAC domain profile. 23 192 IPR003441 GO:0003677|GO:0006355
Aip03g03740 330 SUPERFAMILY NAC domain 18 192 IPR036093 GO:0003677|GO:0006355
Aip03g03740 330 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03740 Aip-Chr3 119569467 119571408 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03740 4 330 NAC Transcription Factor Family AT1G61110 56.977 1.72e-115 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aip03g03740 NAM 2.5e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03740 - - gmx:100792372 402.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03740 03 119569467 119571408 Aip10g00490 10 4890806 4892678 PCT