Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03731 ATGGCTTGTGCAAATTTGGCATTGCATTTTCGAATTCTCATCATGTCAGTGATGATTTTTGCAGCTACTTTCTGTGTTGGAGACACTGACCCCCTTGATGTTGCAGCAATCAATAGCTTATATGTAGCACTAGGATCACCTCCCCTTCAAGGGTGGAAACCTACAGGAGGAGATCCATGTGTGGAACAGTGGCAAGGTGTCAGCTGTGTCTTCTCCAATATAACTGCTTTACAACTTGGAAGCATGAATTTGAGTGGACAGCTTGGAAGTAATTTGGATTTTCCATCCATCATAGAAATGGATATTAGCAACAACAGCATTGGAGGGACCATTCCATCCACTCTGCCATCTACTTTGAAGAGATTGTCTCTTTCGGAGAATAAGTTAAATGGAAGCATTCCGGATGCCTTATCCATGTTAATTCAACTAACAGAATTGTCATTAAACAATAACCATCTAACTGGACAAATCCCAGATGTGTTTCTACAATTCACCAGTTTGACAAATATGAATCTGTCAGGTAACAACTTGAGTGGTCAGCTACCTCCCTCGATTGTGAATTTATCATCTCTTACTACATTACACTTGCAGAACAATCAACTTGGTGGAACCCTTTTTGTTTTGGAGGACCTCCCTCTTCAGAATCTGAATATAGAGAACAATCTATTCTCTGGGCCGATTCCTCCAAAGTTGTTGACTATTCCTGAATTCAGAAAAGATGGGAATCCCTTTAATACTACTATTATTCACTCACCTCCAGCTGCAGCTCCTTCACCTGAAGCCATGGTTCCTTCTCCTTCCCCTACTCCTTCCACTGAAAAGTCACATGGTAAAGGGGCAAAAAGTCCCTCAATGACCATGAAAGCTCCAACACCTTTGATTACTAGGAGTTCCTTTGAAGTTAAGAACATGGTTTGGTGGATTGCTGGTTTTGGGATCATAATATTTATTGCGTTAGGAATTTGCCTTTTTATGTGTTGGTACTGTAAGAGAAGACCAAGGAGCAAGAATTATGAGGAACATAAAGACATGGATGTTTATATTGATGAGGAGAAAGGACAGGGCTCAAAACTTCCACCGCTGCAACAAGCACTGCCACATCCTCTCCCAATAATTTCTGGAGAGAATTTCATCAGTCCAGCTAAATCCACCAAAGTAATTGAAGGTGGAAAACAAATTATAACCAGTTCCATCAGGGTTTATTCTGTTGCATTGCTTCAGCAGTACACAGATAGTTTTTCACAAGAAAACTATATAGGAGAAGGCACACTTGGCCCTCTTTATAAGGGTGAGCTCCCTGATGGAAAGTTGCTGGCTGTGAGGAAGCTGAATGCTTCCATGGTGCAGAATCATGAGCAGTTTCTTCAATTAGTATTCAGTATCTCCAAAATTCAACATCCAAACATTGTAAAACTTTTAGGCTACTGCACCGAGCACAGCCAATGGCTACTTGTGTATGAGTATTGCAGCAATGGAACCCTTCATGATGCATTGCATACTGATGATAACACTCGCGTTAAACTTTCATGGAACGAAAGAATCCAGGTGTCACTCGGAGCTGCTAGAGCTTTACAGTATCTGCATGAGAACTTCCAGCCACCTGTTGTGCAGCGAAATTTTCGATCTTCTAACGTTCTCCTGAATGACAAGATGGAAGTGTGTGTCTCTGACTGTGGATTAGGTTCTTTACTATCTTCAGAGCAGGTCGTGACGGCTCAGGGCTATGATGCTCCAGAGTTTGAATCAGGGAGTTATACACAAAAGAGTGATGTATTCAGTTTTGGAGTTGTGATGCTAGAACTCCTAACCGGGCGAAAAGCCTTTGACAGGTGGCGGCCTCGGGGAGAGCAATCTGTGGTGAGATGGGCAGTGCCTCAGCTGCATGACATTGATGCATTGTCTGAAATGGTAGATCCCTCCTTGAACGGAGCCTACCCTCCTCCTCCTATGAAATCCTTGTCACGTTTTGCTGATGTTATTTCTTCATGTTTACAGCATGAACCTGAATTCCGACCTGCAATGTCTGAAATCGTTCAAGATCTCTTGCGAATCACGTCAAGTCTTGGATGA 2070 0.4251 MACANLALHFRILIMSVMIFAATFCVGDTDPLDVAAINSLYVALGSPPLQGWKPTGGDPCVEQWQGVSCVFSNITALQLGSMNLSGQLGSNLDFPSIIEMDISNNSIGGTIPSTLPSTLKRLSLSENKLNGSIPDALSMLIQLTELSLNNNHLTGQIPDVFLQFTSLTNMNLSGNNLSGQLPPSIVNLSSLTTLHLQNNQLGGTLFVLEDLPLQNLNIENNLFSGPIPPKLLTIPEFRKDGNPFNTTIIHSPPAAAPSPEAMVPSPSPTPSTEKSHGKGAKSPSMTMKAPTPLITRSSFEVKNMVWWIAGFGIIIFIALGICLFMCWYCKRRPRSKNYEEHKDMDVYIDEEKGQGSKLPPLQQALPHPLPIISGENFISPAKSTKVIEGGKQIITSSIRVYSVALLQQYTDSFSQENYIGEGTLGPLYKGELPDGKLLAVRKLNASMVQNHEQFLQLVFSISKIQHPNIVKLLGYCTEHSQWLLVYEYCSNGTLHDALHTDDNTRVKLSWNERIQVSLGAARALQYLHENFQPPVVQRNFRSSNVLLNDKMEVCVSDCGLGSLLSSEQVVTAQGYDAPEFESGSYTQKSDVFSFGVVMLELLTGRKAFDRWRPRGEQSVVRWAVPQLHDIDALSEMVDPSLNGAYPPPPMKSLSRFADVISSCLQHEPEFRPAMSEIVQDLLRITSSLG 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03731 689 Gene3D Phosphorylase Kinase; domain 1 378 488 - -
Aip03g03731 689 MobiDBLite consensus disorder prediction 249 289 - -
Aip03g03731 689 SUPERFAMILY Protein kinase-like (PK-like) 394 681 IPR011009 -
Aip03g03731 689 Pfam Leucine rich repeat N-terminal domain 33 69 IPR013210 -
Aip03g03731 689 Pfam Leucine rich repeat 142 201 IPR001611 GO:0005515
Aip03g03731 689 Gene3D Ribonuclease Inhibitor 35 249 IPR032675 -
Aip03g03731 689 PANTHER LEUCINE RICH REPEAT KINASE 2 9 345 - -
Aip03g03731 689 PANTHER LEUCINE RICH REPEAT KINASE 2 379 684 - -
Aip03g03731 689 ProSiteProfiles Protein kinase domain profile. 413 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g03731 689 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 379 684 - -
Aip03g03731 689 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 9 345 - -
Aip03g03731 689 SUPERFAMILY L domain-like 32 233 - -
Aip03g03731 689 Gene3D Transferase(Phosphotransferase) domain 1 489 688 - -
Aip03g03731 689 Pfam Protein tyrosine and serine/threonine kinase 416 681 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03731 Aip-Chr3 119479880 119483981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03731 12 676 Strubbelig Receptor Gene Family AT1G53730 40.890 3.53e-155 464
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Aip03g03731 PK_Tyr_Ser-Thr 9.2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03731 - - gmx:100794130 919.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03731 03 119479880 119483981 Aip10g00500 10 5048026 5053197 PCT