Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03718 ATGGCTTCTGCTGCTGCTTCCGTGTCTTCTTCCTCCTTGCCGTCGTCCGGGTTCTGCTACAACCCTGAATGTAAAGAATTGAAGTCTCAAATACCTAAGAAAGGTTGGAGACTCCGTTCCGGAGACCGAGCTGAACTTTGTGATCGATGCGGATTTTGCGAGACTTTTCATTTGAACACTTCTGGTTGGAGGAACTGTGAGACTTGTAGGAAGCGGATTCATTGTGGATGTATTGTCTCAGATAACTCGTTTATGTTGTTGGATCCTGGTGGAGTTGAATGTAATGTATGTGCAAAGGAACATCATATGTCATCAACCCGGCCATGGTCTCAGTCTTTTTGCTCTAATTTATCTCTAAGACTTAGAGACATCTCCACAAATAATTGGAATCAGTTAGCTGGATCAGGTCCTGTACCATGGAAGCAAGCACCCAGCCTATATAATTCTGTTTCTTCATCCAACCTGCAGCCAGGTGTGGCCTCTCTAGTTGAATTGACACATAAACTTGGCAAAATTTATGGAAATGAAAGATTGCCTGATTTTTCTCTGGGAAAGAAAAATGAAAATTTTCCTGGAATATCCAACTGGAACACTAAGCTTGAATCACAGGAGATAATGCTTGTGAATGGAGCAATGAATGAGGACAAACCTAGTTCATGTTTAAATCTTTGCCAGCAGTCTTCTTCTGTAAAGGAGGATTCATCTCCGCAACCTTTTGCATTGCCTGTACCTTATGCATCTCCAAATGAAAGAAATGGTCAACCCGGGGGGAATCAACTACAACAAACCCCTCCAGCTCCTCTAGGAAAGCAATATAGTGGCACTGTTCATTTATCACTTGACACATCAGGTGAAACACAAGTTCGTAATGGACGGCCTCGAGTAGATGCACGAGGAAGAAGCCAGTTACTCCCACGGTACTGGCCCAGATGTACCGATCAGGAGCTACAGCAAATATCTATCGATTCTAATTCTGTCATTACCCCGTTGTTTCAAAAAACCTTGAGCGCTAGTGATGCTGGGCGAATTGGGCGTCTAGTGCTTCCAAAGAAGTGTGCTGAGGCTTATTTCCCTCCAATTTCACAGCCTGAAGGGTTGCCACTCAAAATCCTTGATGCAAAAGGCAAAGAGTGGATATTTCAGTTTCGTTTCTGGCCCAACAATAACAGTAGAATGTATGTTTTGGAAGGTGTCACTCCCTGCATACAGTCCATGCAGTTGCAAGCAGGTGACACAGTAACATTTAGCCGGCTGGAGCCAGAAGGGAAGTTGGTTATGGGATTTCGAAAGGCTTCAACTGCTACCCAATCTGATCAGGACAATGAAGCAAATAAGACCGGAAATGGACACTCCACAATTGGTGAAGTTGAAATGGCTGATCCTAGTTCATGGTCTAAAGTTGATAAATCAGGATACATTGCAAAAGAAGCACTTGGGAGCAAATCTTCAATCTCTAGAAAGAGAAAGAGCAGCATCTTGGGTTCAAAGAGTAAACGTTTAAAAATTGAAAATGAGGATTTGATAGAACTCAAGATTACTTGGCAAGAGGCTCAAGGCCTGCTAAGGCCGCCTCCTGACCATGTCCCTAGCATTGTGGTGATTGAAGGTTTTGAATTTGAGGAATATGAGGATGCTCCAGTGCTGGGTAAACCAACCATTTTCACCACTAGTAATGAAGGTGAAAAGATCCAGTGGGCTCAATGTGAAAATTGTCTCAAGTGGCGCAAATTGCCAGCAAGTGCAATTCTTCACTCAAAATGGACGTGCTCTGACAATTCATGGGACCCAGAAAGATCCTCTTGCTCAGTGGCACAAGAGCTGACTGCAGAAGAGCTCGAGAATTTGCTACCTTCTTGTAATTCAGTTATTTCAAAGAAAATGAAGGCCACTAAGCAAGAGACAGATAATTTTGATGCTATGGAAGGACTTGATACACTTGCGAACCTAGCTATCTTGGGGGAGGATGAGTCACTCCCTACGTCTACCCAGGTTACAACGAAACACCCCAGGCATAGACCTGGCTGCTCTTGCATTGTTTGCATTCAACCTCCCAGTGGGAAGGGCCCTAAGCATAAGCAGACATGCACATGTACTGTCTGCTCGACCGTGAAACGTCGATTCCTTACCCTACAACAGAAGCGTGAGAAGAAACAAACAGAAAAGGCGGAGACAATACGGAAAAGGCAGCAGCCTCCTCCCCCGGGACAATCAGCTGAAATAGTGATTGAAGATGACTCGTTGCCTTGTAGTAATGCAGGAGATAGCAGCCCAAACCCAAACAAGGATGGAAATGGCGGTTCAGATGACGATCCTAACCGGATAAAATCATCTAACTTACCATTCAAAGGTCAAATCGACCTCAATATCCAGCCCGAGCGAGAGGAAGAGTTGTCGCCGCGATCAGATTCTGGTGGCATGAAGGCACTGCTTGATGGCACAGAAAGACATCTCAGGCAGCTGAATATTTTGAACTCCGGGGATGCAGATTCTTCAGGTAGCCAGTCAAAGGGAGTTGGAGATGAAACAAGGGAACAAAAACTCAGCAATGGTGTAGTCCTCGGAAATAATAGTCACAATTCTGATAGGGAGCTTGTGCAGCCTTTGACTATGAATGTGTGA 2619 0.4464 MASAAASVSSSSLPSSGFCYNPECKELKSQIPKKGWRLRSGDRAELCDRCGFCETFHLNTSGWRNCETCRKRIHCGCIVSDNSFMLLDPGGVECNVCAKEHHMSSTRPWSQSFCSNLSLRLRDISTNNWNQLAGSGPVPWKQAPSLYNSVSSSNLQPGVASLVELTHKLGKIYGNERLPDFSLGKKNENFPGISNWNTKLESQEIMLVNGAMNEDKPSSCLNLCQQSSSVKEDSSPQPFALPVPYASPNERNGQPGGNQLQQTPPAPLGKQYSGTVHLSLDTSGETQVRNGRPRVDARGRSQLLPRYWPRCTDQELQQISIDSNSVITPLFQKTLSASDAGRIGRLVLPKKCAEAYFPPISQPEGLPLKILDAKGKEWIFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRLEPEGKLVMGFRKASTATQSDQDNEANKTGNGHSTIGEVEMADPSSWSKVDKSGYIAKEALGSKSSISRKRKSSILGSKSKRLKIENEDLIELKITWQEAQGLLRPPPDHVPSIVVIEGFEFEEYEDAPVLGKPTIFTTSNEGEKIQWAQCENCLKWRKLPASAILHSKWTCSDNSWDPERSSCSVAQELTAEELENLLPSCNSVISKKMKATKQETDNFDAMEGLDTLANLAILGEDESLPTSTQVTTKHPRHRPGCSCIVCIQPPSGKGPKHKQTCTCTVCSTVKRRFLTLQQKREKKQTEKAETIRKRQQPPPPGQSAEIVIEDDSLPCSNAGDSSPNPNKDGNGGSDDDPNRIKSSNLPFKGQIDLNIQPEREEELSPRSDSGGMKALLDGTERHLRQLNILNSGDADSSGSQSKGVGDETREQKLSNGVVLGNNSHNSDRELVQPLTMNV 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03718 872 MobiDBLite consensus disorder prediction 711 808 - -
Aip03g03718 872 SMART B3_2 331 432 IPR003340 GO:0003677
Aip03g03718 872 MobiDBLite consensus disorder prediction 225 273 - -
Aip03g03718 872 MobiDBLite consensus disorder prediction 711 727 - -
Aip03g03718 872 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300-LIKE ISOFORM X1 15 804 - -
Aip03g03718 872 MobiDBLite consensus disorder prediction 251 273 - -
Aip03g03718 872 Gene3D - 309 436 IPR015300 -
Aip03g03718 872 MobiDBLite consensus disorder prediction 821 872 - -
Aip03g03718 872 MobiDBLite consensus disorder prediction 821 838 - -
Aip03g03718 872 MobiDBLite consensus disorder prediction 848 872 - -
Aip03g03718 872 Pfam B3 DNA binding domain 331 430 IPR003340 GO:0003677
Aip03g03718 872 MobiDBLite consensus disorder prediction 749 784 - -
Aip03g03718 872 ProSiteProfiles B3 DNA-binding domain profile. 331 432 IPR003340 GO:0003677
Aip03g03718 872 Gene3D - 563 617 - -
Aip03g03718 872 Pfam CW-type Zinc Finger 564 606 IPR011124 GO:0008270
Aip03g03718 872 MobiDBLite consensus disorder prediction 432 456 - -
Aip03g03718 872 CDD B3_DNA 329 430 IPR003340 GO:0003677
Aip03g03718 872 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 15 804 - -
Aip03g03718 872 SUPERFAMILY DNA-binding pseudobarrel domain 328 430 IPR015300 -
Aip03g03718 872 ProSiteProfiles Zinc finger CW-type profile. 559 609 IPR011124 GO:0008270
Aip03g03718 872 MobiDBLite consensus disorder prediction 432 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03718 Aip-Chr3 119290456 119298204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03718 286 717 B3 DNA Binding Superfamily AT4G32010 56.720 1.44e-160 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Aip03g03718 B3 7.5e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03718 - - gmx:100807252 1315.06