Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03716 ATGCAAAGGACACTCTACCCTGATCTCTGTGTCTCAACCTTATCCACATTCCCAAACCTTGAAACAAAAGCAATGCCACAAATAATCTCCAAAGTAGTCAACCACACAGTCCATGAAGTCAAATCTTCATCCAACAACTGCACCACCACAATCAAGAATCTCCAAAACACTCTCAACACAAATGAGAAAAGAGCCTTAGATGATTGTCTCAAACTCTTTGATGACACCATAGTAGAACTCAACACCACCATTCTTGATCTCTCAAAAAATCCATCATCATCATCATCTTCCAACCAAGATTTGGAAACTCTACTAAGTGGGGCAATGACAAATTTGTACACTTGTCTTGATGGTTTCTCACAAAGCAAAAATGGGAATGCTGTGAGAGGGTTGATAGAGGAGAAAGTGATTGAGATATCACATCATGTTAGTAACTCATTGGCAATGTTGAAGAAAGTGAAGACAAGTTTGAAGAAAGAACAAGTGTTTGCTGAATATGGAAAAATGAAGAAAGGGTTCCCTTCATGGGTTTCTGCTAAGGATAGGAAGCTTCTAGAAGGTGGAAATGTGAATGAAACTAAGATTGATGTTGTTGTGGCTAAAGATGGTTCTGGAAATTTTACTACTATTGGTGAAGCTGTAGCTATGGCTCCTAATTCTAGCACAACCAGGTTTGTGATATACATAAAAAGTGGAGCATACTTCGAGAATGTGGAAGTAATTAGAAAGAAGACTAGTTTGATGTTTATTGGAGATGGCATTGGAAGGACCATTATCAAGGCAAGTAGGAATGTTGTCGATGGCTGGACCACTTTTCAATCAGCTACTGTTGGTAACCATTTTTCTCCTTTGATTTCTTCTACTTATTAA 870 0.3828 MQRTLYPDLCVSTLSTFPNLETKAMPQIISKVVNHTVHEVKSSSNNCTTTIKNLQNTLNTNEKRALDDCLKLFDDTIVELNTTILDLSKNPSSSSSSNQDLETLLSGAMTNLYTCLDGFSQSKNGNAVRGLIEEKVIEISHHVSNSLAMLKKVKTSLKKEQVFAEYGKMKKGFPSWVSAKDRKLLEGGNVNETKIDVVVAKDGSGNFTTIGEAVAMAPNSSTTRFVIYIKSGAYFENVEVIRKKTSLMFIGDGIGRTIIKASRNVVDGWTTFQSATVGNHFSPLISSTY 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03716 289 TIGRFAM PME_inhib: pectinesterase inhibitor domain 3 152 IPR006501 GO:0004857
Aip03g03716 289 Pfam Plant invertase/pectin methylesterase inhibitor 3 149 IPR006501 GO:0004857
Aip03g03716 289 CDD PMEI-like_3 4 152 - -
Aip03g03716 289 Pfam Pectinesterase 196 279 IPR000070 GO:0030599|GO:0042545
Aip03g03716 289 Gene3D Invertase/pectin methylesterase inhibitor family protein 2 154 IPR035513 -
Aip03g03716 289 SMART PMEI_2 1 149 IPR006501 GO:0004857
Aip03g03716 289 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 3 152 IPR035513 -
Aip03g03716 289 PANTHER PECTINESTERASE 2 277 - -
Aip03g03716 289 PANTHER PECTINESTERASE 2 277 - -
Aip03g03716 289 SUPERFAMILY Pectin lyase-like 194 277 IPR011050 -
Aip03g03716 289 Gene3D - 190 283 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03716 Aip-Chr3 119248334 119249867 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03716 27 286 Carbohydrate Esterase AT4G02320 46.691 9.86e-72 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03716 K01051 - adu:110278297 395.201