Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03709 ATGCATGTTGCAAATGCTCAGATACGATCTTTTAACTTCAATAAAAACTTCAACCCAGCTCAATCTCCTGAACTAAACCCAGATGGAGATGCAACTTACTCACAGTCTTTTGATCATATCCAACTCACAGGAAAAACAGATAATGCCAAGGGATTAGGAAGAATCACAACCAAGCCTATGCATCTTATGAAAAACAATTCAGAACAAAGATATGACTTCACTACCAACTTTACCTTTGTTGTTATCTCAAACAAGACCTACCATGGAGAAGGTTTGGCATTCTTCATAGCAAGCCATATGCTGCCAATTAAGAAACATGGTATGAACGGTGGAGGGCTTGGTCTTGTGGAACCTTGTCACCCTCACCCAGATGAGTACTCTTTTGTGGCTGTGGAGTTTGACACTAAGTCAGATCCTTGGGACCCAATAGGCCCAGAGCCACATGTGGGAATAGATGTCAATTCTATGATTTCCACCAAGCACAGCAAATGGCCTGCAGATTTCTCAGACATAACCAATGTTTACAACTGCAGTGTCGTATACAGCGCCGGAAGCAGGCGTCTCGACGTTTACTTCACCGGAGGATCCTTCAATGGCCCTGTACCAAAAAACCTTTCAAGCCACTTGGATCTCACTGATTACTTAAATGATCCTGTTACTCTTGGCATTTCAGCTTCAACACAGAATTATACTGTTCAATTTAGACTGCTTTCATGGTCATTCATTGCAAAGTTATCGACACCAAGTAATGCTGGTGATGACAACAGAAAACGGGAGAAATTGAAGCAAGGACTAGAAATTGGCACTGCTTGGTTTTTGAGTTTGTTAGTGTTGGTCCTGGTCTTGGATTTCATACGCAAGAGAGGAAGAAGAAAACATGAACTCGATCCTATGGATCATGAATTCCAAACTGGACCTCAGAGGATCAGTTACAACATATTGGTGTCTGCCACAAATAACTTTGAAGAGGCGAAGAAGCTCGGAAAAGGTGGCTTTGGTGGTGTTTATAAAGGATATTTCAAAGATACAGACTCTTATGCTGCTGTAAAGAAGATATCAGCAGATTCAAGGCAAGGGATAAAGGAATATGCAGCTGAAGTGAAGATCATCAGCCAATTGAGACACAGGAATTTGGTTAGACTTACTGGTTGGTGTCACAAGAAGAATGACTTCATCCTGATATATGAGTACATGCCAAATGGAAGCTTGGATTCTTGTCTTTTCGACGGCGTAGGCTTCTTGTCTTGGCAAGTAAGGTACAGCATAGCTTTGGGATTGGCATCAGCATTGCTGTATTTGCAAGAAGGGTGGGAACAATGTGTGCTTCACAGGGACATTAAATCAAGCAACATAATGTTGGACTCAGATTTCAATGCTAAGCTTGGGGATTTTGGATTGGCCAGGCTTGTGGATCATGAGAAAGGTTCAAGGACCACAGTGACTGCTGGCACACTTGGTTACATAGCACCAGAATACATGAAAACAGGAAAAGTTGGGAAGGAATCTGATATATACAGTTTTGGGGTGGTTTTGTTGGAGATAGCATGCGGCAAAAAGGCTATTCATCACATAGAGATGGAGGGTTGTGTGACTCAAGTTTCATTGGTAGAGTGGGTTTGGGAGCTGTATGGGTTGAGAAGCATCACAGCAGCAGCAGATCCAAATCTATGTGTTGCATTTGATGTTCAACAAATGGAATGTATGCTTGTTGTTGGTCTTTGGTGTGCTCATCCAGATTGCAAATGCAGGCCTTCTATAAGGCAAGTGTTGAAGGTTCTTAACTTTGATGCTCCTTTACCTATTCTTCCACAAAGGATGCCTATTCTACCACCCTATCTTCCTCTATCAACAAATGAGGTCTTTTTTACTGCTATATGA 1878 0.4196 MHVANAQIRSFNFNKNFNPAQSPELNPDGDATYSQSFDHIQLTGKTDNAKGLGRITTKPMHLMKNNSEQRYDFTTNFTFVVISNKTYHGEGLAFFIASHMLPIKKHGMNGGGLGLVEPCHPHPDEYSFVAVEFDTKSDPWDPIGPEPHVGIDVNSMISTKHSKWPADFSDITNVYNCSVVYSAGSRRLDVYFTGGSFNGPVPKNLSSHLDLTDYLNDPVTLGISASTQNYTVQFRLLSWSFIAKLSTPSNAGDDNRKREKLKQGLEIGTAWFLSLLVLVLVLDFIRKRGRRKHELDPMDHEFQTGPQRISYNILVSATNNFEEAKKLGKGGFGGVYKGYFKDTDSYAAVKKISADSRQGIKEYAAEVKIISQLRHRNLVRLTGWCHKKNDFILIYEYMPNGSLDSCLFDGVGFLSWQVRYSIALGLASALLYLQEGWEQCVLHRDIKSSNIMLDSDFNAKLGDFGLARLVDHEKGSRTTVTAGTLGYIAPEYMKTGKVGKESDIYSFGVVLLEIACGKKAIHHIEMEGCVTQVSLVEWVWELYGLRSITAAADPNLCVAFDVQQMECMLVVGLWCAHPDCKCRPSIRQVLKVLNFDAPLPILPQRMPILPPYLPLSTNEVFFTAI 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03709 625 PANTHER LECTIN RECEPTOR KINASE 14 623 - -
Aip03g03709 625 CDD STKc_IRAK 335 594 - -
Aip03g03709 625 ProSitePatterns Serine/Threonine protein kinases active-site signature. 441 453 IPR008271 GO:0004672|GO:0006468
Aip03g03709 625 Pfam Legume lectin domain 10 249 IPR001220 GO:0030246
Aip03g03709 625 Gene3D Phosphorylase Kinase; domain 1 306 397 - -
Aip03g03709 625 SMART serkin_6 321 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g03709 625 CDD lectin_legume_LecRK_Arcelin_ConA 10 241 IPR001220 GO:0030246
Aip03g03709 625 PANTHER - 14 623 - -
Aip03g03709 625 ProSiteProfiles Protein kinase domain profile. 321 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g03709 625 SUPERFAMILY Protein kinase-like (PK-like) 303 613 IPR011009 -
Aip03g03709 625 Gene3D Transferase(Phosphotransferase) domain 1 398 608 - -
Aip03g03709 625 SUPERFAMILY Concanavalin A-like lectins/glucanases 7 247 IPR013320 -
Aip03g03709 625 Pfam Protein kinase domain 321 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g03709 625 ProSitePatterns Legume lectins beta-chain signature. 129 135 IPR019825 -
Aip03g03709 625 Gene3D - 8 247 - -
Aip03g03709 625 ProSitePatterns Protein kinases ATP-binding region signature. 327 351 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03709 Aip-Chr3 119170931 119172808 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03709 10 608 Receptor kinase-like Gene Family AT5G10530 43.019 4.30e-160 472
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Aip03g03709 Pkinase 1.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03709 - - cam:101492002 612.453