Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03682 ATGGACGGCGGAGGAGGCAACAGAGCGGAAGCCGAGCGCTGGCTCTACACGGCCAACAAGCTCCTGAGCGCACGTGACTTGCATGGGGCTCAGTCCTTCGCGATCCGGGCGCGTGAATCCGACCCAACGTTCGATGCGTCTGAGCTCCTCTTGACGGTGATTGACACGCTCCTCGCCGGCGAAACGCGGATCAACGACCAGCACCGCGACTGGTACGGGATCCTTCAGATCCTCCGTTACTCCACCAACATCGACCACATCGCAGCTCAGTACCACCGCCTCGCCCTACTCCTCGACCCGCACCGTAACCCCTTCGCCTTCGCCGCACACGCCTTCTCCCTCATCCACGATGCCTGGTCGGTCCTCTCCAACCCCGCCAAGAAGGCCATGTACGACGCAGACCTCCGGTTGCTCACCTCCACTCCTCCGCCGGCGCCGGCCGCGACACAGCACCACCATCACCAGCACCACCAGCATAATCCCCTGACGCAAGCTCAGCCTCAGTCTACGCCGAGGAGAAACCCTAGATCTAAGGACGCTGCGAGCGGGGCGAGCGATCCGAATGTGCAGAATCGGACAGCGGCCGAGTCAGCTCGGCAGACTCGGACGGCCGTCGCTGCGGCCTCGAACGACGCGGCGGCAACGGAGTCGAGTTTCTGGACCTCGTGTCCTTATTGTTACGTTCTGTATGAGTACCCTAGGGTTTACGAGGAGTGCACCCTGCGGTGCCAGAGCTGCCGCAGGGGGTTCCAGGCGGTGGTGATAAGGTCGCCGCCGCTGAACGGAAAGGACTCATCGTTCTGCAGCTGGGGTTTTTTCCCGTTGGGATTTTCGCAGGATTCAAAGGACATTAACGGGTTTTCTTCCAATTGGAACCCATTTTCGCCGCTGTTCCCCTGCCCCTTAAAGGGGTCCAATCGGAGGAAGGCGTCTTGGACTTACTATGACGACGAAGCCGCTGCGGCATTTGTGGAGCTTTCAGATCCCAGCGAGGATGATTCTGATGATGGAGATTGGAGAACTGGTTCTAAGAAGGCGAGGAAGAAGTCAAGAGTTTCTACAAGAGATCCCGGTTCTTCACCGAGGAAGGCTGGGAGACCTAGGAAGGTGATTCCGGGTAGTGCACAGCATCAGAATGTGGGGGGTGGGGCTGTGGATGGTGGCGGTGGAGGTGGTGGGGCTGCAGGGGCAAGTGGTGGAAGGCCAGAGTCTAGTAAGAAGGTTGCATTGGGTGGTTCGAGGAGGAGGGGTGGAGGGAACTTGGACTTGAATGTGGAGTTCAGTAATGACCCGGAAGAGCCTTCTCGTCGCGTAGGCGTCCGTGAAGGGAATGCTGCTGGGAATGCTGAGGATAACATGGAAGGGATTGGGTTCTTTGAGGGACTTGATGAGTTCCTCAGTAGCTTGCCCATTCTCAATGTTGTGGCAGATGATAAGGCTAAGGATGATGCATTCAGGGCTTCAACGATCTTTGGTCGATCCATCATAACAGCGAAAATCCAGCATACGCATTTGAAACTATTCACGGATTCAAGGCAAGGGTTCTCTTTGAAGGCTTTTGCGCAGCGTCAAAGAATTGAGCAACATCCTAATAAGAGCAAGCTGCAGATTCTGCCTGAAGTGGAAAATAAGTGTGATATATTTAATGATCTAAAAGATAGGTTTTTGGGTTTTAAGAAGAATAAATATTTGAAAAACATAGAACATTTCCAAGAACTTGCCCAGGCTCAAGCACCAAAGTTCATGGTTATTGCCTGTGCAGATTCTAGGGTTTGCCCCTCTCATATTCTAGGATTTCATCCAGGAGAAGCATTCATGATCCGCAATGTTGGTAATTTGGTTCCTCCCTTTGAGAGTGGGCCGTCTGAAACAAATGCTGCCCTAGAATTTGCTGTGAACACCCTTGAAGTTGAGCACATCTTAGTCATTGGCCACAGCTGCTGTGGGGGAATACGTGCCCTTATGAGTATGCAAGATGATGCCAATGAAAGTAGCTTTATAAATAGCTGGGTGGTAGTTGGAAAGAATGCCAGAATCAAAACTGAAGCTGCTGCTTCTCAGCTGAACTTTGATCAACAGTGCAGCCATTGTGAGAAGGAATCAGTTAACAATTCCTTGTTAAACCTACTTACGTATCCATGGATAGAAGAAAAGGTAGCAAATGGAAAACTAAATGTTCATGGTGGTTACTATGACTTTATCGACTGTTCTTTTGAGAAATGGACGATGAGTTACAGGGAAACCAAAATGGCTAAAAATAGCAGAATTGCAGCTGTAAACAAAATGTTTTGGTGCTGA 2298 0.5191 MDGGGGNRAEAERWLYTANKLLSARDLHGAQSFAIRARESDPTFDASELLLTVIDTLLAGETRINDQHRDWYGILQILRYSTNIDHIAAQYHRLALLLDPHRNPFAFAAHAFSLIHDAWSVLSNPAKKAMYDADLRLLTSTPPPAPAATQHHHHQHHQHNPLTQAQPQSTPRRNPRSKDAASGASDPNVQNRTAAESARQTRTAVAAASNDAAATESSFWTSCPYCYVLYEYPRVYEECTLRCQSCRRGFQAVVIRSPPLNGKDSSFCSWGFFPLGFSQDSKDINGFSSNWNPFSPLFPCPLKGSNRRKASWTYYDDEAAAAFVELSDPSEDDSDDGDWRTGSKKARKKSRVSTRDPGSSPRKAGRPRKVIPGSAQHQNVGGGAVDGGGGGGGAAGASGGRPESSKKVALGGSRRRGGGNLDLNVEFSNDPEEPSRRVGVREGNAAGNAEDNMEGIGFFEGLDEFLSSLPILNVVADDKAKDDAFRASTIFGRSIITAKIQHTHLKLFTDSRQGFSLKAFAQRQRIEQHPNKSKLQILPEVENKCDIFNDLKDRFLGFKKNKYLKNIEHFQELAQAQAPKFMVIACADSRVCPSHILGFHPGEAFMIRNVGNLVPPFESGPSETNAALEFAVNTLEVEHILVIGHSCCGGIRALMSMQDDANESSFINSWVVVGKNARIKTEAAASQLNFDQQCSHCEKESVNNSLLNLLTYPWIEEKVANGKLNVHGGYYDFIDCSFEKWTMSYRETKMAKNSRIAAVNKMFWC 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03682 765 CDD DnaJ 70 124 IPR001623 -
Aip03g03682 765 SUPERFAMILY beta-carbonic anhydrase, cab 541 752 IPR036874 GO:0004089|GO:0008270
Aip03g03682 765 MobiDBLite consensus disorder prediction 141 202 - -
Aip03g03682 765 SUPERFAMILY Chaperone J-domain 66 135 IPR036869 -
Aip03g03682 765 ProSitePatterns Nt-dnaJ domain signature. 112 131 IPR018253 -
Aip03g03682 765 SMART Pro_CA_2 574 742 IPR001765 GO:0004089|GO:0008270
Aip03g03682 765 Pfam Carbonic anhydrase 582 734 IPR001765 GO:0004089|GO:0008270
Aip03g03682 765 Gene3D DnaJ domain 59 142 IPR036869 -
Aip03g03682 765 Gene3D Carbonic anhydrase 540 750 IPR036874 GO:0004089|GO:0008270
Aip03g03682 765 CDD beta_CA_cladeB 554 741 IPR045066 GO:0004089|GO:0008270
Aip03g03682 765 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 586 593 IPR015892 GO:0004089|GO:0008270|GO:0015976
Aip03g03682 765 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 629 649 IPR015892 GO:0004089|GO:0008270|GO:0015976
Aip03g03682 765 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 482 - -
Aip03g03682 765 MobiDBLite consensus disorder prediction 160 202 - -
Aip03g03682 765 MobiDBLite consensus disorder prediction 326 439 - -
Aip03g03682 765 SMART dnaj_3 69 127 IPR001623 -
Aip03g03682 765 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 4 482 - -
Aip03g03682 765 Pfam DnaJ domain 70 132 IPR001623 -
Aip03g03682 765 ProSiteProfiles dnaJ domain profile. 70 135 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03682 Aip-Chr3 118919343 118925168 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03682 10 481 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 41.093 2.16e-95 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03682 K01673 - gmx:100811866 599.742