Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03652 ATGGGGAATTGCTTGTGTAGGTTGGAATCTTCAGATTATAGAGTCTCTTCTAATGCAAAGCCAGATTCAACAAGAGAGGAAAACCAGGCAATGAAACAAAGGAATGATAATAGTAGGTTACCAACAAATCCTGAGGAAGTGGAAAACCTACTATTACGCCGTGATTCAGCTGCGAATCCATTGATTGTATTCAGTTATGATGAGCTAAAGATAATAACTGCAAATTTTAGGCCGGATCGTGTGTTGGGGGGTGGCGGATTTGGAAGTGTATATAAAGGGTTCATCTCTGAGGAGTTAAGGCAGGGTCTTCCTACTCTTCCTGTGGCTGTTAAGGTTCATGATGGTGATAACAGTCATCAAGGCCACAGAGAATGGTTGGCAGAAGTCATATTTTTGGGGCAGCTATCACATCCGAATCTAGTCAAATTAATTGGATACTGCTGTGAAGATGAACATAGGGTGCTAATTTATGAGTTTATGGCCCGTGGAAGTGTCGAAAACAATTTGTTCTCCAAAATATTGCTTCCATTGCCATGGTCCATAAGAATGAATATTGCATTTGGAGCTGCAAAGGGACTTGCATTTCTTCACGAGGCAGAGAAACCTGTCATCTATCGTGATTTCAAAACATCAAATATTTTATTGGACCTGGACTATAATGCAAAACTTTCTGACTTTGGCCTTGCTAAAGATGGGCCAGTTGGAGACGAATCCCATGTTTCGACTCGCATAATGGGAACATATGGCTATGCTGCACCGGAGTACATAATGACAGGTCATTTGACCCCCAGAAGTGATGTTTACAGCTTTGGCGTTGTTCTTCTGGAACTTCTGACGGGAAGAAAATCGCTAGACAAGTTAAGGCCAGCAAGAGAACAGAACCTTGCAGATTGGGCTCTTCCTCTGCTGAAGGAGAAGAAAAAACTTCTAAACATCATAGATCCAAGGCTTGAAGGTGACTATCCAATAAAAGGTGTTCACAAGGCTGCAATGCTTGCTTACCATTGCTTGAACCGCAATCCAAAGGCTCGGCCGCTAATGCGAGATATTGTGGACTCATTGGAGCCTTTGCAGGCACACAATGAGATCCCTATCCAAAAAACATTGACCATAATTAGTGAAGTTGCTGAAGCTGATTTAAGAAAAGGAAAAATGCAGAATCACTGA 1167 0.4207 MGNCLCRLESSDYRVSSNAKPDSTREENQAMKQRNDNSRLPTNPEEVENLLLRRDSAANPLIVFSYDELKIITANFRPDRVLGGGGFGSVYKGFISEELRQGLPTLPVAVKVHDGDNSHQGHREWLAEVIFLGQLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKILLPLPWSIRMNIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDLDYNAKLSDFGLAKDGPVGDESHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLELLTGRKSLDKLRPAREQNLADWALPLLKEKKKLLNIIDPRLEGDYPIKGVHKAAMLAYHCLNRNPKARPLMRDIVDSLEPLQAHNEIPIQKTLTIISEVAEADLRKGKMQNH 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03652 388 Pfam Protein tyrosine and serine/threonine kinase 79 354 IPR001245 GO:0004672|GO:0006468
Aip03g03652 388 Gene3D Phosphorylase Kinase; domain 1 42 159 - -
Aip03g03652 388 Gene3D Transferase(Phosphotransferase) domain 1 160 378 - -
Aip03g03652 388 SUPERFAMILY Protein kinase-like (PK-like) 56 354 IPR011009 -
Aip03g03652 388 ProSitePatterns Protein kinases ATP-binding region signature. 82 111 IPR017441 GO:0005524
Aip03g03652 388 MobiDBLite consensus disorder prediction 15 43 - -
Aip03g03652 388 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Aip03g03652 388 ProSiteProfiles Protein kinase domain profile. 76 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g03652 388 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL16-RELATED 9 367 - -
Aip03g03652 388 PANTHER OS01G0588500 PROTEIN-RELATED 9 367 - -
Aip03g03652 388 MobiDBLite consensus disorder prediction 19 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03652 Aip-Chr3 118357211 118361789 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03652 22 354 Glycoside Hydrolase AT3G07070 47.965 1.47e-102 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Aip03g03652 PK_Tyr_Ser-Thr 2.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03652 - - gmx:100775722 663.685