Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03650 ATGACTGAAACCGAGATTATTGACAACCTGCTGCAGCTGCTTTTCTCTGGCCACAACACTACTAGATCGGTTATATCGTCTATCATGAAGTATCTTGGCGACCTGCCTGAAGTATATGAACAGGTTTTGAAAGAACAACTCGAAATTAGCAGAGGGAAAGGGACAGGGGAATTGTTACAATGGGAGGATGCTCAGAAAATGAAATACTCTTGGAATGTTGCATCTGAGGTCATGAGGCTATCCCCACCAGTGAATACTAATTTCAAAGAAGCAATAAGGGATTTTAACTATGCTGGCTATACCATTCCTAAAGGGTGGAAGCTGCGTTGGGCCACGTGTTCAACACACATGGATCCAGAATACTTCCCGAATCCGGAAGCTTTTGATGCATCAAGGTTTGAAGGGGAAGGTCCTACAGCCTATTCATATGTTCCATTTGGGAGAGGGCCTAGAATGTGTCTGGGAATAGAGCTTGCAAGGTTGGAGATACCTGTGTTCATGCATCACATTGTGGAACGGTTCAAGTGGGATTTGGTGAATCCTGATGAGAAGTTTAAGTATGATCCCTTGCTTGAGCCAGTAAAAGGACTTCCGGTTCGGCTACACCCTCGCCATGTCTAG 621 0.4493 MTETEIIDNLLQLLFSGHNTTRSVISSIMKYLGDLPEVYEQVLKEQLEISRGKGTGELLQWEDAQKMKYSWNVASEVMRLSPPVNTNFKEAIRDFNYAGYTIPKGWKLRWATCSTHMDPEYFPNPEAFDASRFEGEGPTAYSYVPFGRGPRMCLGIELARLEIPVFMHHIVERFKWDLVNPDEKFKYDPLLEPVKGLPVRLHPRHV 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03650 206 Pfam Cytochrome P450 1 183 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g03650 206 Gene3D Cytochrome P450 1 204 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g03650 206 PANTHER BETA-AMYRIN 28-OXIDASE-LIKE ISOFORM X1 1 194 - -
Aip03g03650 206 PRINTS E-class P450 group I signature 5 22 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g03650 206 PRINTS E-class P450 group I signature 111 135 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g03650 206 PRINTS E-class P450 group I signature 143 153 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g03650 206 PRINTS E-class P450 group I signature 153 176 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g03650 206 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 146 155 IPR017972 GO:0005506|GO:0016705
Aip03g03650 206 PRINTS P450 superfamily signature 16 33 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g03650 206 PRINTS P450 superfamily signature 72 83 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g03650 206 PRINTS P450 superfamily signature 144 153 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g03650 206 PRINTS P450 superfamily signature 153 164 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g03650 206 SUPERFAMILY Cytochrome P450 1 204 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g03650 206 PANTHER CYTOCHROME P450 26 1 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03650 Aip-Chr3 118351875 118352739 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03650 1 199 Cytochrome P450 AT3G19270 38.424 4.37e-43 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03650 - K20667 adu:107480504 347.821