Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03635 ATGTTGAACATGGATTTGAGCGTTCAGTTTAGTGGTGGCGAGGATGATTCAGATCGGCTTACTGAAGAAGAGTATTTCGGTATGTCTTGTTCAAGTGGGGACGACGACGACGACTCCTTTGGGAATGACTCCGAGATGGAGGATTTTGTCGGCAAAGTGTTTAGCACTGAGGAAGAGGCTTATGCGGCATACAAACAGCTTGCCCGGCTAAGGGGGTTCGGTGTAAGGAAGGGTGACGTGGCTCGAATAAATGGTTTGTTGGTAAGGCAAGACATTTTTTGTCATCGGCAGGGTACAAGGCATGAGAAACACTATGATCGTCCAAAAAGAGTACGGGAGGAGAGGTTGGAGAGTCGCACGGGTTGCTTGGCAAAGTTGAAAATTTACTATGATACGCAAGACCAGCTTTGGAAAGTGAGGAGGATCGAGGACAGTCATAACCACCCTCTTGCTACAACTATGTTTAGTCATCTTCTTCGTAGTCATTGGACTCTGAGTGAGAGTGATAAGGCTCAAGTTGATAGTCTGAAAAAATTCGGGATTGCCACATTGAAGATTATGGCTTACATGGCCGGGCAGTTAGGGGGCTATGGGATACTTCGGTTTACGAAGAGGGATCTAAATAACTATGTTCACAGCCAAAGAATAGCTCAAATAAATAATGGAGATGCAGTAGCAACGATAAGTTACTTGGAGGGCAAGGCCAATGCTAACATGATGATGGTCGCCAAATATACCAAAACAGCAGAGGATCGACTTGGTAGCCTCTTCTGGGCTGATGGGCAGATGATCGCAGATTACCAATTGTTCGGTGACGTGCTTGCATTTGATGCAACATACCAGTCCAACAAATACAAGAAGCCACTAGTAGTCTTCTCTGGATCAAATCACCACAAGCAGACGGCGATTTTCGGGTTTGCATTATTGAAGGACGAGGAGGTCTGTACGTATAAGTGGGTTTTGTTGAACATTCTTGATGTCATTGATAACAAGACGCCTTCTGTTTTTTGCGAAAGTGTTGCCTTTATCCAGACATCACCTATGTGCCTGGCACAAGGAAAAAAATTGTGTGTTGAGTGA 1080 0.45 MLNMDLSVQFSGGEDDSDRLTEEEYFGMSCSSGDDDDDSFGNDSEMEDFVGKVFSTEEEAYAAYKQLARLRGFGVRKGDVARINGLLVRQDIFCHRQGTRHEKHYDRPKRVREERLESRTGCLAKLKIYYDTQDQLWKVRRIEDSHNHPLATTMFSHLLRSHWTLSESDKAQVDSLKKFGIATLKIMAYMAGQLGGYGILRFTKRDLNNYVHSQRIAQINNGDAVATISYLEGKANANMMMVAKYTKTAEDRLGSLFWADGQMIADYQLFGDVLAFDATYQSNKYKKPLVVFSGSNHHKQTAIFGFALLKDEEVCTYKWVLLNILDVIDNKTPSVFCESVAFIQTSPMCLAQGKKLCVE 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03635 359 Pfam MULE transposase domain 273 336 IPR018289 -
Aip03g03635 359 PANTHER OS02G0262500 PROTEIN 39 333 - -
Aip03g03635 359 Pfam FAR1 DNA-binding domain 64 151 IPR004330 -
Aip03g03635 359 MobiDBLite consensus disorder prediction 1 21 - -
Aip03g03635 359 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 39 333 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03635 Aip-Chr3 117771595 117772753 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip03g03635 FAR1 2.4e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03635 - - ahf:112717862 529.635