Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03634 ATGCTCACTATGACGCAACAGAATGTGGTTGTGCCCGCCGAGGAGACTAAAAGGGCGCAAAAGCCACCGGCTATACCGGGAGCCTACATTCCCATTCCCAGGAGGACTGTCTTGAAGACCCTTGAAATCAATGCTTGGCTTGACTCCATGAGAGCTTCTTCTCCCACTCATCTCAAATCCACTCCTTCTCTCGCTCAAGACCACTCCTCTTCTTGGATTCTTAACCACCCATCGGCACTAGACATGTTTCAACAAATCATACATGCATCAAAGGGAAAGCAAATAGTCATGTTTCTCGACTATGATGGCACCTTGTCACCCATAGTCGATGACCCCGATCGTGCTTTCATGTCCGATTCAATGAGAAAGACTGTGAGGAAGCTTGCAACGTGTTTTCCTACTGCTATAGTTACGGGCAGATGCAGAGACAAGGTATATAACTTTGTTCGGTTGGCGGAACTATATTATGCTGGAAGCCATGGCATGGATATAAAAGGCCCAACAAAGACCTCCAAATATAACAAAGACACCAAGTCAGAGGCAGTTCTTTTTCAACCTGCCGCTGAATTTCTTCCTCTCATAGATGAGGTGTACCAACAGTTGGTTGAGAAAACGAAATCAACTCCTGGTGCCCGGGTGGAGAACAACAAATTTTGTGTCTCTGTTCATTTTCGTTGTGTTGACGAGAAGAAATGGAGTGAACTGGCGCAACAAGTAAGATCAGTGTTAAAGAAGTACCGGAAGCTTCGTCTTAGCCAAGGGAGGAAGGTATTGGAGATTCGTCCTACTATTAAATGGGACAAAGGGAAGGCCCTCGATTTTTTGTTAGAGTCTCTTGGATTTGCCAACTGTAGTGATGTATTTCCTGTTTATATTGGAGATGATAGAACCGATGAAGACGCATTCAAGGTATCCGAGTACTCCTCTCGATTTTTTATTCCATTGTTATAA 951 0.4458 MLTMTQQNVVVPAEETKRAQKPPAIPGAYIPIPRRTVLKTLEINAWLDSMRASSPTHLKSTPSLAQDHSSSWILNHPSALDMFQQIIHASKGKQIVMFLDYDGTLSPIVDDPDRAFMSDSMRKTVRKLATCFPTAIVTGRCRDKVYNFVRLAELYYAGSHGMDIKGPTKTSKYNKDTKSEAVLFQPAAEFLPLIDEVYQQLVEKTKSTPGARVENNKFCVSVHFRCVDEKKWSELAQQVRSVLKKYRKLRLSQGRKVLEIRPTIKWDKGKALDFLLESLGFANCSDVFPVYIGDDRTDEDAFKVSEYSSRFFIPLL 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03634 316 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 16 305 - -
Aip03g03634 316 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 97 306 IPR006379 -
Aip03g03634 316 Gene3D - 177 263 - -
Aip03g03634 316 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 16 305 IPR044651 GO:0004805|GO:0005992
Aip03g03634 316 CDD HAD_TPP 96 304 - -
Aip03g03634 316 Pfam Trehalose-phosphatase 98 306 IPR003337 GO:0003824|GO:0005992
Aip03g03634 316 SUPERFAMILY HAD-like 96 306 IPR036412 -
Aip03g03634 316 TIGRFAM T6PP: trehalose-phosphatase 93 304 IPR003337 GO:0003824|GO:0005992
Aip03g03634 316 Gene3D - 97 306 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03634 Aip-Chr3 117738451 117740910 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03634 80 303 Trehalose Biosynthesis Gene Families AT1G60140 25.532 3.43e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03634 K01087 - gmx:100794430 503.442