Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03624 ATGTATTGCCCCACTGAGAAACTTCAGCGGCCACAGCAAAAGGTTCAGTGTTGCTTTGAAGCAGAAGCAAGTCTTGCTCTAATGGAGTCTTGTGTTCTTGTGATGTTGATGAAAGGTGAAGATATTTATGTGATGAAGGTTGGAGATAGTAGAACTCTTCTTGCTCAGAAGGGGCTAGAGAAGAGAAGAAGAAGACCAGCGACAGAAGCAGTGCACTGGGTCAGAGATGCTCTGTCGCTGTTTGCAGTGGTCGCTGACGTCGTTCAGGCCTTGAGGGTTAGAGATGCTCTGTCGCCGTCGTCACTGGGAGCCGAGGATGGGGATCGGGTCAGGGTGCGTGGAAGAGGGGGAGTGAGGCATGGAGGCAGTGAAGCTTGCGTGAAGAGTGAAGACGTGAATGTGTGTGCATGTCCTAGACCCCTTCCACTAGTTAGGAAATTAGAAACTGATCCCTCCACCGGGCCGGGCCGGGTAACCCGGGCTATGGCCCGGTCCTGGTTTCATACCTTCCCTTGGCTTCATATTTTTTTTCCGGGTCAGCCTCGGGTCACTTCAGGTCCGGGCCAACATGCCCCAAATTGCTTTGGGTCCGGGCCGGACCGGACCTTGTACACCCCTAGTTATGACAATATCATCctatga 642 0.5234 MYCPTEKLQRPQQKVQCCFEAEASLALMESCVLVMLMKGEDIYVMKVGDSRTLLAQKGLEKRRRRPATEAVHWVRDALSLFAVVADVVQALRVRDALSPSSLGAEDGDRVRVRGRGGVRHGGSEACVKSEDVNVCACPRPLPLVRKLETDPSTGPGRVTRAMARSWFHTFPWLHIFFPGQPRVTSGPGQHAPNCFGSGPDRTLYTPSYDNIIL 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03624 213 PANTHER PROTEIN PHOSPHATASE 2C 23-RELATED 21 68 - -
Aip03g03624 213 Gene3D - 5 174 IPR036457 -
Aip03g03624 213 SUPERFAMILY PP2C-like 22 62 IPR036457 -
Aip03g03624 213 PANTHER PROTEIN PHOSPHATASE 2C 21 68 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03624 Aip-Chr3 117370034 117378880 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03624 15 113 PP2C-type Phosphatase Gene Family AT2G46920 37.500 9.46e-12 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03624 - - mus:103972175 62.003