Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03607 ATGATCATTGATTTGGCTGTGGTTACTGTTCTAAGGTCGTATAATGAGACTGGTCAGTTTTGGTTACTTTTGGTGATGATGTTATTGTTAAATAAGCATTGGATGCAGCTGATGAGTTTCAACAGGGACGAATTCTATTACCGGCCCACAGAGCCGTTAGGATGGTGGGCCGGCGACATTATATTGGGCGGAAGGGATGAGCTCGGCGGTGGCACATGGTTGGGCTCCACCAGAGATGGAACGGTGGCTTTCCTCACCAATTTTAGGGAAGTTGAAAGCCTTCTGGAACCCAAGACCAGGGGAGACTTGACCATCCGATTCCTTCAGAGTAAGAAGAGTCCTCAGGAGTTTGCAGAGAAAATTGTTGAAGAGGCACATGTATATAATGGCTTCAATCTAGTTTGTATTGATATTTGCAGCTTCAATCTAGGCTGCTCAGAAAGACCAAGCTTAGCTGGTAAGGATGACCAGGGGGTAAAACGCATGAACCTGATTGCTCGTGCTGCTGAGTCAATTGCTGATGGGGATCTAGTGAATGTACAGATTCGAAGATATCGACAGTGGGGATCTGACCTTTGA 579 0.4611 MIIDLAVVTVLRSYNETGQFWLLLVMMLLLNKHWMQLMSFNRDEFYYRPTEPLGWWAGDIILGGRDELGGGTWLGSTRDGTVAFLTNFREVESLLEPKTRGDLTIRFLQSKKSPQEFAEKIVEEAHVYNGFNLVCIDICSFNLGCSERPSLAGKDDQGVKRMNLIARAAESIADGDLVNVQIRRYRQWGSDL 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03607 192 Pfam Transport and Golgi organisation 2 37 141 IPR008551 -
Aip03g03607 192 PANTHER SER/THR-RICH PROTEIN T10 IN DGCR REGION 33 143 IPR008551 -
Aip03g03607 192 Gene3D - 132 190 - -
Aip03g03607 192 SUPERFAMILY post-AAA+ oligomerization domain-like 156 188 IPR008921 GO:0003677|GO:0006260
Aip03g03607 192 PANTHER TRANSPORT/GOLGI ORGANIZATION-LIKE PROTEIN (DUF833) 33 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03607 Aip-Chr3 117080012 117081478 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03607 148 188 Core DNA Replication Machinery Family AT5G22010 75.610 1.68e-12 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03607 - - aip:107631119 262.692