Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03597 ATGATTTGTATAGCAATATTTCTAGTCTCTCTTGCTTGTCTCTGGCTATGGGGATTCACCAACAAGAACAAGAAATTACCTCCTGGTCCAAGAGGGTTACCAATTTTGGGTAGCCTTCATAAGTTGGGAGATAATCCTCATCTTGATCTTCACAAACTAGCACAAAAACATGGACCAATCATGTACCTGCGCCTAGGTTTGGTGCCAACCATTGTTGTCTCTTCTCCACAAGCTGCTGAACTCTTTCTTAAAACCCATGACCTTGTTTTTGCAAGTAGACCACCCCATGAAGCTGCAAAGTACATTGCATGGGAGCAGAGGAACATGAGTTTTGGTGAATATGGTCCTTATTGGCGCAACATGCGAAAGATGTGCACCTTGGAACTACTAAGCCAAACAAAGATTAACTCATTCAGACGCATGAGGCAAGAGGAGGTTGAATCATTGATCAACGTTCTTAGAGAAGCAGCAAAAGATGGAGTTGCTGTGGATGTCAGTGCTAAGGTTTCAACAGCGAGTGCTGACATGAGTTGTAGAATGGTTTTTGGGAAGAAATACGATGACAAAGACTTGGATGAGAAGGGTTTCAAGAGTGTTATACAAGAAGGGATGCAATTATCGGCAACTCCAAACATAGGTGATTATATTCCTTATATTGGTAAACTTGATCTTCAAGGCTTAACTAGGCGCATGAAGGCTGTGGGGAAAAAATTTGATGAGTTTTTTGAGAAAGTTATTGATGACCACTTGCAATCATCTGAGAACAGAGAAGATAAAGTTAAGGACTTTGTGGATGTCATGTTGGGCTTTCTAGGCACTGAGGAATCTGAATACCGTCTTGAACGCCCTAATATCAAAGCCATATTGCTGGATATGCTGGCAGGTTCAGTGGACACATCAGCAACGGCAATAGAGTGGGCACTTTCAGAGCTAATAAAGCATCCAAGAGTGATGAAAAAACTTCAAATAGAGTTAGAATCTGTGGTTGGTATGAAGAGAATGGTGGAGGAGTCAGACTTAGACAAGTTAGAATATTTGGACATGGTCATCAAGGAAACCATGAGGATCCATCCAGTGGCACCATTACTAATACCACACCAATCTATGGAAGATTGCATGGTTGGAGATTTCTTCATACCCAAGAAATCAAGAGTCATAATAAATGCATGGGCAATCATGAGGGACCCAAGTGCTTGGAGTGAGCCAGAGAAGTTCTGGCCGGAGAGATTTGAGGGAAGAGAGATTGACATCAAAGGTAGAGATTTCCAATTTATACCATTTGGGTCTGGGAGAAGAGGATGCCCTGGATTGCAGTTAGGTCTAACAGTGGTTCGGTTGGTGGTGGCACAACTTGTGCATTGCTTTGATTGGAAGTTACCAAATAAGATGTTGGCATCTGAATTGGACATGACTGAGGAGTTTGGTCTCACTATGCCAAGGGCCAATCATTTATTTGCGATACCTACTTATAGGCTTCAGAATGAAAGTGGTTAA 1494 0.421 MICIAIFLVSLACLWLWGFTNKNKKLPPGPRGLPILGSLHKLGDNPHLDLHKLAQKHGPIMYLRLGLVPTIVVSSPQAAELFLKTHDLVFASRPPHEAAKYIAWEQRNMSFGEYGPYWRNMRKMCTLELLSQTKINSFRRMRQEEVESLINVLREAAKDGVAVDVSAKVSTASADMSCRMVFGKKYDDKDLDEKGFKSVIQEGMQLSATPNIGDYIPYIGKLDLQGLTRRMKAVGKKFDEFFEKVIDDHLQSSENREDKVKDFVDVMLGFLGTEESEYRLERPNIKAILLDMLAGSVDTSATAIEWALSELIKHPRVMKKLQIELESVVGMKRMVEESDLDKLEYLDMVIKETMRIHPVAPLLIPHQSMEDCMVGDFFIPKKSRVIINAWAIMRDPSAWSEPEKFWPERFEGREIDIKGRDFQFIPFGSGRRGCPGLQLGLTVVRLVVAQLVHCFDWKLPNKMLASELDMTEEFGLTMPRANHLFAIPTYRLQNESG 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03597 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 427 436 IPR017972 GO:0005506|GO:0016705
Aip03g03597 497 PRINTS E-class P450 group I signature 54 73 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g03597 497 PRINTS E-class P450 group I signature 172 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g03597 497 PRINTS E-class P450 group I signature 284 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g03597 497 PRINTS E-class P450 group I signature 304 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g03597 497 PRINTS E-class P450 group I signature 347 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g03597 497 PRINTS E-class P450 group I signature 388 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g03597 497 PRINTS E-class P450 group I signature 424 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g03597 497 PRINTS E-class P450 group I signature 434 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g03597 497 Gene3D Cytochrome P450 19 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g03597 497 PANTHER CYTOCHROME P450 93A3-LIKE 2 493 - -
Aip03g03597 497 Pfam Cytochrome P450 27 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g03597 497 SUPERFAMILY Cytochrome P450 27 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g03597 497 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 2 493 - -
Aip03g03597 497 PRINTS P450 superfamily signature 295 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g03597 497 PRINTS P450 superfamily signature 348 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g03597 497 PRINTS P450 superfamily signature 425 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03597 Aip-Chr3 116821293 116823282 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03597 8 489 Cytochrome P450 AT3G26300 39.715 3.13e-132 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03597 K20562 - gmx:100809526 807.749