Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03595 ATGTTTTTCATAGCAATAATTTTTTTTTCACTTATTTGTCTGTGGCTATGGGGATCCAACAACAAGGCTAAGAGATTACCTCCTGGTCCAAGAGGGTTGCCAATCTTGGGAAGCCTTCACCTCTTGGGGGGAAATCCTCATCGTGATCTTCACCGGCTAGCACAAAAATATGGATCTATCATGCACTTGCGCCTAGGTTTTGTTCCCACCATAGTTGTTTCTTCACCCCAAGCTGCTGAATTGTTCCTTAAGATCCATGACCATGTCTTTGCAAGTAGACCACCTAGTGAAGCTGCAAAGTACATCTTTTGTGGGCAGAGGGACATTGCCTTTGGTGAATACGGTCCTTATTGGCGCAACATGCGTAAGATGTGCACCTTGGAACTACTAAGCCAAACAAAGATCAACTCTTTCAGAAGCATGAGGCAAGAGGAGATTAACTTGTTTATCAAGCTTCTGAGAGATGCAGCCAATGATGGTGTTGCCGTTGATGTTAGTGCCAAGATTGCAACACTGAGTGCTAACATGAGTTGTAGAATGGTTCTGGGGAAGAAATACATGGATCAGGACATGGATAAAAAAGGGTTCAAATCTGTGATGCAAGAGTCATTGCGTTTAGCCGCCGTTCCAAACATAGGTGACTATATTCCGTATGTTGGTGCACTTAACCTTCAAGGATTAACTAAGGGCATGAAGGCAACGGGGAAAATATTTGATAACTTTTTTGAGAAAGTTATTGACGAGCACATTCAATCAGAGAGCAAAGAAGACAAGGTCAAGGACTTTGTGGATGTCATGTTGGGCTTTCTTGGCACTGAAGAATCTGATTATCGTGTTGATCGCCTGGATATCAAAGCCATATTGCTGGATATGATGCTGGCTTCAACAGATACTTCAGCTGCAGCAATAGAGTGGGCACTTTCAGAGCTAATAAAGCATCCAAGGGTGATGAAGAATCTTCAAATGGAGTTGGAATCTGTGGTGGGAATAAAGAGGGTAGTGGAGGAATCAGACTTGGACAAATTGGAGTATTTGGACATGGTCATCAAGGAAACCATTAGGATCCATCCAGTGGGGCCATTACTAATACCACACCAATCCATGGAAGATTGCAAGGTTGGAGATTTCTTCATACCCAAGAAATCCAGGGTGATAATAAATGCATGGGCAATTATGAGAGATCTAAGTGCTTGGATTAAGCCAGAAGAATTTTGGCCAGAAAGGTTTGAGCGAATAGACGTTGATTTTAGAGGGAGAGACTTCCGATTTATACCATTTGGATCTGGCAGAAGAGGATGCCCTGGAATACAGCTAGCCCTAACTGTTGTCCGGTTAGTGGTGGCCCAGCTTGTGCATTGCTTTGATTGGAAGTTACCGAATAACTTGTTGCCAAGTGAATTAGACATGAGTGAGGAGTTTGGCCTCTCAATGCCTAGGGCCAACCATCTATTTGCCATTCCTTCTTATCGTCTTCACAATGAAAGGGGTTAG 1491 0.4326 MFFIAIIFFSLICLWLWGSNNKAKRLPPGPRGLPILGSLHLLGGNPHRDLHRLAQKYGSIMHLRLGFVPTIVVSSPQAAELFLKIHDHVFASRPPSEAAKYIFCGQRDIAFGEYGPYWRNMRKMCTLELLSQTKINSFRSMRQEEINLFIKLLRDAANDGVAVDVSAKIATLSANMSCRMVLGKKYMDQDMDKKGFKSVMQESLRLAAVPNIGDYIPYVGALNLQGLTKGMKATGKIFDNFFEKVIDEHIQSESKEDKVKDFVDVMLGFLGTEESDYRVDRLDIKAILLDMMLASTDTSAAAIEWALSELIKHPRVMKNLQMELESVVGIKRVVEESDLDKLEYLDMVIKETIRIHPVGPLLIPHQSMEDCKVGDFFIPKKSRVIINAWAIMRDLSAWIKPEEFWPERFERIDVDFRGRDFRFIPFGSGRRGCPGIQLALTVVRLVVAQLVHCFDWKLPNNLLPSELDMSEEFGLSMPRANHLFAIPSYRLHNERG 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03595 496 PRINTS E-class P450 group I signature 54 73 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g03595 496 PRINTS E-class P450 group I signature 172 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g03595 496 PRINTS E-class P450 group I signature 283 300 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g03595 496 PRINTS E-class P450 group I signature 303 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g03595 496 PRINTS E-class P450 group I signature 346 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g03595 496 PRINTS E-class P450 group I signature 387 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g03595 496 PRINTS E-class P450 group I signature 423 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g03595 496 PRINTS E-class P450 group I signature 433 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g03595 496 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 426 435 IPR017972 GO:0005506|GO:0016705
Aip03g03595 496 PANTHER CYTOCHROME P450 93A3-LIKE 5 492 - -
Aip03g03595 496 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 5 492 - -
Aip03g03595 496 Gene3D Cytochrome P450 17 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g03595 496 PRINTS P450 superfamily signature 294 311 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g03595 496 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g03595 496 PRINTS P450 superfamily signature 424 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g03595 496 PRINTS P450 superfamily signature 433 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g03595 496 SUPERFAMILY Cytochrome P450 27 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g03595 496 Pfam Cytochrome P450 27 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03595 Aip-Chr3 116812280 116814274 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03595 34 491 Monolignol Biosynthesis Gene Families AT4G36220 41.719 6.60e-128 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03595 K20562 - gmx:100809526 766.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03595 03 116812280 116814274 Aip03g03595 03 116812280 116814274 ECH