Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03574 ATGGATTACTATTATGTGAACCCAATAAACCCCAATTACGGTGCTCATCATGATGATGATGACTACTCTGCCATGATGAGCATGTCCGATTTCATGATATCCGATTTTCTTGTGGCTGATGATGATGCATATGGGTATGGTGTTGATGATCATCATCATAATAATCAAGAGAGTGGATCACAATCGCAAAGTACTAATGAATCGTCGGAGATGGCAGCCTTCAGCGATGTCACTACTACCAATAATAGTGGTGAAGCCTCTAGCATCAACAATAACATAAAATGCAAAAATGGGAGTAAGAAAGAAGTGAATTCAAGAGTGGCGTTTAGAACGAAATCGGAGCTTGATGTTATGGATGATGGATACAGATGGAGGAAGTACGGAAAAAAGGCCGTCAAGAACACTCCAAATCTAAGGAACTATTACAAGTGTTCGAGTGAAGGATGCGGTGTGAAGAAGAGGGTGGAAAGGGACAGAGACGACTCAAGCTATGTTATAACAACCTATGAAGGGATACACAATCATGCAAGCCCTTTTACCTACTAA 546 0.4084 MDYYYVNPINPNYGAHHDDDDYSAMMSMSDFMISDFLVADDDAYGYGVDDHHHNNQESGSQSQSTNESSEMAAFSDVTTTNNSGEASSINNNIKCKNGSKKEVNSRVAFRTKSELDVMDDGYRWRKYGKKAVKNTPNLRNYYKCSSEGCGVKKRVERDRDDSSYVITTYEGIHNHASPFTY 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03574 181 Pfam WRKY DNA -binding domain 119 175 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip03g03574 181 Gene3D WRKY domain 102 179 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip03g03574 181 MobiDBLite consensus disorder prediction 57 97 - -
Aip03g03574 181 PANTHER WRKY TRANSCRIPTION FACTOR 50-RELATED 15 178 - -
Aip03g03574 181 SUPERFAMILY WRKY DNA-binding domain 110 178 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip03g03574 181 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 15 178 IPR044810 GO:0003700
Aip03g03574 181 MobiDBLite consensus disorder prediction 48 97 - -
Aip03g03574 181 SMART WRKY_cls 118 177 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip03g03574 181 ProSiteProfiles WRKY domain profile. 113 178 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03574 Aip-Chr3 116363230 116365719 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03574 83 177 WRKY Transcription Factor Family AT5G64810 65.000 4.17e-41 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip03g03574 WRKY 1.2e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03574 - - adu:107480370 306.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03574 03 116363230 116365719 Aip03g03574 03 116363230 116365719 ECH