Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03558 ATGCCTAATTGCGCTTATGCGATTATAGGTGGTTGCACTAAGAGAAAACAGAACGTGCAGCTGAGAAATCCTTTTGCTTCAGTTAGCATGGGAGAGGAGAAGCCATTTGATTTCTTACGCACTTTATTTGAGGGCGTTATAGCAGGAGGTACAGCCGGAGTCGTAGTTGAAACAGCTTTATACCCAATTGACACTATAAAAACACGTTTGCAGGCCGCTCGGGGAGGAGAAAAACTAATACTGAAGGGACTTTATTCTGGATTGGCAGGGAACCTTGCTGGTGTCTTACCGGCATCAGCTTTATTTGTTGGAGTTTATGAGCCTATGAAGCAGAAACTGTTGAGGATGTTTCCTGAAAACCTGAGTGCTTTTGCTCATCTGACTGCAGGTGCCATAGGGGGCATTGCTGCTTCACTGATTCGCGTTCCAACAGAGGTTGTTAAGCAACGAATGCAAACTGGACAGTTTACTTCAGCTGCTGGTGCTGTCCGCTTCATTGCTGCTAAGGAAGGTTTTAAAGGACTTTATGCTGGGTATGGATCTTTTTTATTGCGGGATTTGCCCTTTGATGCTATTCAGTTTTGCATCTATGAGCAGATTAGGATGGGTTATATGGCTGCGGCCCGAAGAAATTTGAATGATCCAGAAAATGCAATTATTGGTGCATTTGCAGGTGCACTAACTGGAGCTATAACAACTCCCCTTGATGTCATCAAGACAAGATTAATGGTTCAGGGATCTACAAACCAATATAATGGAATCGTAGATTGTGTTCAAACAATTATCAAGGAAGAAGGACCTAGTGCACTTTTGAAGGGTGTTGGGCCTCGAGTACTGTGGATAGGGATCGGTGGTTCGATATTCTTTGGTGTTCTTGAGGGTACAAAACGTTTTCTGGCTGAGAGGCGTCCTACACCTTCAGAGTCTCAGCCAGAAAAGGTTGAATAA 948 0.4399 MPNCAYAIIGGCTKRKQNVQLRNPFASVSMGEEKPFDFLRTLFEGVIAGGTAGVVVETALYPIDTIKTRLQAARGGEKLILKGLYSGLAGNLAGVLPASALFVGVYEPMKQKLLRMFPENLSAFAHLTAGAIGGIAASLIRVPTEVVKQRMQTGQFTSAAGAVRFIAAKEGFKGLYAGYGSFLLRDLPFDAIQFCIYEQIRMGYMAAARRNLNDPENAIIGAFAGALTGAITTPLDVIKTRLMVQGSTNQYNGIVDCVQTIIKEEGPSALLKGVGPRVLWIGIGGSIFFGVLEGTKRFLAERRPTPSESQPEKVE 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03558 315 Pfam Mitochondrial carrier protein 121 204 IPR018108 -
Aip03g03558 315 Pfam Mitochondrial carrier protein 42 76 IPR018108 -
Aip03g03558 315 Pfam Mitochondrial carrier protein 216 301 IPR018108 -
Aip03g03558 315 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 14 309 - -
Aip03g03558 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 121 203 IPR018108 -
Aip03g03558 315 Gene3D Mitochondrial carrier domain 40 310 IPR023395 -
Aip03g03558 315 PANTHER S-ADENOSYLMETHIONINE CARRIER 1, CHLOROPLASTIC/MITOCHONDRIAL 14 309 - -
Aip03g03558 315 SUPERFAMILY Mitochondrial carrier 43 293 IPR023395 -
Aip03g03558 315 PRINTS Mitochondrial carrier protein signature 221 243 IPR002067 GO:0055085
Aip03g03558 315 PRINTS Mitochondrial carrier protein signature 45 58 IPR002067 GO:0055085
Aip03g03558 315 PRINTS Mitochondrial carrier protein signature 58 72 IPR002067 GO:0055085
Aip03g03558 315 PRINTS Mitochondrial carrier protein signature 176 194 IPR002067 GO:0055085
Aip03g03558 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 40 112 IPR018108 -
Aip03g03558 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 216 298 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03558 Aip-Chr3 115873678 115881935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03558 119 304 Chloroplast and Mitochondria Gene Families AT1G07030 29.843 3.23e-16 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03558 K15111 - gmx:100811130 521.161