Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03556 ATGATGTCAACAACAACAACTTCACAAACTATGGTTAATAACCAAAGCTTATTTGGGGAGCAAGATCATGATAATGAGAATATGGCTACAGAAATGGGATTTCTTCCTCTTCTACCAACAAACATGATCTTCCCTACGTCTCCTTTGGGATGCAATCAACAACAACCCTGCTACTCGTTATTGAAACCCTTCTCTTCGATATTATCTCCAAATTCACTTGCATCTGATCAAGCTGATTCAACATCAAACCTAACCGCTGAAACCCTACTCGCAACTGATGCGCAACAAAAATCAGGATTGGACCTCACCTCTACCACTTTTCTTGGACCTCAGTTCCTATCTTTGAACAGATCCAGTATAAGTAATCCATGGGCAACGGGAGAAGTACCTGATTGCTTCAGCAGTAAAAGAAATGTAGTAGATAATCATCATCATCATGTGGGGGTTCCTACCATTAAGATGAAGAAAATCAAGGGAAGAAGAAAGGTTAGAGAGCCTAGGTTTTGCTTCAAGACTATGAGCGATGTAGATGTCTTGGACGATGGCTACAAATGGAGGAAGTACGGTCAAAAAGTGGTCAAGAACACACAGCATCCCAGAAGCTACTACCGTTGCACACAAGACAATTGTCGCGTAAAGAAACGTGTGGAGCGCTTAGCTGAGGATCCAAGAATGGTGATAACAACATACGAAGGAAGACATGCACACACTCCATCCAATGATCTTGAAGACTCTCAACCTCCCTCTCAACTTACCAACTTCTTCTGGTAG 771 0.4215 MMSTTTTSQTMVNNQSLFGEQDHDNENMATEMGFLPLLPTNMIFPTSPLGCNQQQPCYSLLKPFSSILSPNSLASDQADSTSNLTAETLLATDAQQKSGLDLTSTTFLGPQFLSLNRSSISNPWATGEVPDCFSSKRNVVDNHHHHVGVPTIKMKKIKGRRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHAHTPSNDLEDSQPPSQLTNFFW 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03556 256 ProSiteProfiles WRKY domain profile. 174 239 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip03g03556 256 PANTHER WRKY TRANSCRIPTION FACTOR 13-RELATED 70 245 - -
Aip03g03556 256 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 70 245 IPR044810 GO:0003700
Aip03g03556 256 SMART WRKY_cls 179 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip03g03556 256 SUPERFAMILY WRKY DNA-binding domain 171 237 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip03g03556 256 Gene3D WRKY domain 166 232 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip03g03556 256 Pfam WRKY DNA -binding domain 180 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03556 Aip-Chr3 115809542 115811811 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03556 69 256 WRKY Transcription Factor Family AT4G39410 50.420 9.19e-63 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip03g03556 WRKY 8.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03556 - - adu:107480316 507.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03556 03 115809542 115811811 Aip03g03556 03 115809542 115811811 ECH