Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03537 ATGGCCTCTTCTGAGAGTAGTAACACCGGTAAAAACATGAACCTAGCTTCGGATACTAATCATAGTGGTAGCAAAAACAATGAAAAGAAGCGATCATCGTCGATCGATGATGGCAATATTGTTGTAGAAAGACAAAGAATAGATTGCAAATGCAGCAAGTCAGAGTGCAAGGATAAGCGTTGTCTTTGCTACAGGTTTGGAGTTGGTTGCTCTCTTCGGTGTGGATGTACGAGTTGCAAGAATACGTACGGAATCAAAGAATCCTCTTCGGTCGCAAAGGAACAAGAACATGCTAATGATCAAGAACGTGATAATAATGATGGCAATAGGGGATGCAAATGCAAAAAGACTAAATGCTTGCAGCTCTACTGTGAATGCTTCAAAGCTGGAAAATATTGCAAAGATTCTTGTTCTTGCGAAAATTGCTTGAATAGACCAGAGAATAAGGACTCTGTGAATGAGGCGAAGAAGAAAATAGAGTTGCGTAATCCACGGGCGTTTGAACCCAAGATTACTGTTGTTGATAAAGTAAAAAGACGCAGCAAAGGTTGCGACTGCGAAAAGATTAAGTGCATGGGAAATAATTGTGGTTGCTTCAGATATAAAGTTGGTTGCTCTCTTCAGTGTCGATGTGCTAATTGCAGAAATCCACATGGAACCAAAGACTCCTCTTCTGTCGCAAAGGAGCAAGAACGTGCTAATAATAATGATAATAATGGCAGCAACAACGAGGGAACAACAGTTAATGGATCATCTCCTGAATCTCATCATCCAGTTGTTGACGACAATGGCTTAACTCAGGAAGACAAGAAGGATTGTTATCGACGGCAAATGTTACTGGCCAGAGAGAATGAATTCCACAATATGCCAATGCCATCAAATCAAGTTGTGCCTGTCACGAGAAAAGGACCTGCTGCCGCTGCTTATTATTATTATTATCGTGTTGTTCAAAACCGTGGTGATGCACCTCATTATCAGCCTCTAACCCCGCCGAAGATTTCGAGCGTCCAAAACATTACTGAGCAGCAGAATGCTAACATGCTTGGGGAGCCTAGTTGGCAGGGACAATCATCTTTTCCGAGGCCTCTTTGTATCTATTATGATAATTCTGCAGGGCCCTCATCAGTTCAGCGTAGTCAGCAGTATCAACCTCATCAAAGTTATGGTTCTCATCAACAAGTAGAAGCACCATCAAGTGCAATGACTTGGCAACGTCTATTCCAGCAATAA 1230 0.4195 MASSESSNTGKNMNLASDTNHSGSKNNEKKRSSSIDDGNIVVERQRIDCKCSKSECKDKRCLCYRFGVGCSLRCGCTSCKNTYGIKESSSVAKEQEHANDQERDNNDGNRGCKCKKTKCLQLYCECFKAGKYCKDSCSCENCLNRPENKDSVNEAKKKIELRNPRAFEPKITVVDKVKRRSKGCDCEKIKCMGNNCGCFRYKVGCSLQCRCANCRNPHGTKDSSSVAKEQERANNNDNNGSNNEGTTVNGSSPESHHPVVDDNGLTQEDKKDCYRRQMLLARENEFHNMPMPSNQVVPVTRKGPAAAAYYYYYRVVQNRGDAPHYQPLTPPKISSVQNITEQQNANMLGEPSWQGQSSFPRPLCIYYDNSAGPSSVQRSQQYQPHQSYGSHQQVEAPSSAMTWQRLFQQ 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03537 409 MobiDBLite consensus disorder prediction 23 37 - -
Aip03g03537 409 MobiDBLite consensus disorder prediction 229 256 - -
Aip03g03537 409 ProSiteProfiles CRC domain profile. 1 84 IPR005172 -
Aip03g03537 409 SMART CXC_2 107 148 IPR033467 -
Aip03g03537 409 SMART CXC_2 179 220 IPR033467 -
Aip03g03537 409 SMART CXC_2 44 85 IPR033467 -
Aip03g03537 409 MobiDBLite consensus disorder prediction 1 37 - -
Aip03g03537 409 MobiDBLite consensus disorder prediction 375 401 - -
Aip03g03537 409 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 182 216 IPR005172 -
Aip03g03537 409 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 48 82 IPR005172 -
Aip03g03537 409 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 110 145 IPR005172 -
Aip03g03537 409 MobiDBLite consensus disorder prediction 1 22 - -
Aip03g03537 409 ProSiteProfiles CRC domain profile. 108 219 IPR005172 -
Aip03g03537 409 MobiDBLite consensus disorder prediction 217 268 - -
Aip03g03537 409 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 100 269 IPR044522 GO:0003700
Aip03g03537 409 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 44 104 IPR044522 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03537 Aip-Chr3 115407366 115408818 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03537 44 96 CPP Transcription Factor Family AT3G22760 45.283 1.14e-07 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Aip03g03537 TCR 7.3e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03537 - K21776 ahf:112771246 169.859