Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03522 ATGGGCTCATCAAATGCCTTTGGCTGGGCTGCAACAGATACCTCTGGTCAGCTCTCTCCCTTCCATTTCTCAAGAAGGGAAAACGAAGCTGATGACGTCACTCTCAAAATCCTCTTCTGCGGGGTTTGCCATTCCGATCTGCACACAATCAAGAACGACTGGGGTTTCACTACTTACCCCGTTGTCCCTGGGCATGAAATTGCTGGTATTGTGACAAAAGTTGGAAGTAATGTGACAAAATTTAAGGAGGGGGATAGAGTTGGAGTTGGTGTAATAGTGGACTCATGTAAGGAATGTGAGTGTTGCCAGCAGGATCTGGAGAATTACTGTCCTAGAACTGTGTATACCTATAACTCTCCTTATAAAGGGACACGAACCCAGGGTGGCTACTCCGATTTCGTGGTTGTTCACCAGCGCTTTGTGCTTCGATTTCCCGACAACTTACCCCTTGATGCCGGTGCCCCTCTTCTGTGTGCTGGGATTACTGTGTATAGCCCAATGAAGTATTATGGGATGACAGAGCCCGGCAAGCATTTGGGAGTGGCCGGCCTCGGCGGCTTAGGCCACGTTGCCATCAAATTTGGCAAAGCATTTGGTCTCAAAGTTACTGTCATTAGTGGCTCTCCCAACAAGGAAGCTGAGGCCATTCACACTCTAGGGGCTGATTCTTTCCTTCTTTCCTCTGATCCTGAAAGAATGAAGGCTGCCATGGGAACAATGGATTATATCATCAGCACGATTTCCGCCGTCCATCCGCTGGCTCCCCTGCTTGGTCTGCTGAAGCTGAACGGAAAGCTGGTCAATGTAGGGCTGCCTAGCAAGCCGCTTCAGCTTCCTATCTTCCCCTTGGTTGGAGGAAGGAAGCTTATAGGGGGAAGCAACTTTGGAGGGCTGAAGGAGACTCAGGAGATGCTTGATTTCTGTGCAAAGCATAACATAACTGCAAATATTGAGCTGATTAAGATGGATGAGATCAACACTGCTATCGAAAGGCTCAGCAAATCCGATGTTAAATATCGCTTTGTTATTGATGTTGCAAACTCCTTATCTTCCAGTAACATGTAG 1065 0.4789 MGSSNAFGWAATDTSGQLSPFHFSRRENEADDVTLKILFCGVCHSDLHTIKNDWGFTTYPVVPGHEIAGIVTKVGSNVTKFKEGDRVGVGVIVDSCKECECCQQDLENYCPRTVYTYNSPYKGTRTQGGYSDFVVVHQRFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAIKFGKAFGLKVTVISGSPNKEAEAIHTLGADSFLLSSDPERMKAAMGTMDYIISTISAVHPLAPLLGLLKLNGKLVNVGLPSKPLQLPIFPLVGGRKLIGGSNFGGLKETQEMLDFCAKHNITANIELIKMDEINTAIERLSKSDVKYRFVIDVANSLSSSNM 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03522 354 SUPERFAMILY GroES-like 13 177 IPR011032 -
Aip03g03522 354 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 148 313 IPR036291 -
Aip03g03522 354 SMART PKS_ER_names_mod 16 343 IPR020843 GO:0016491
Aip03g03522 354 Gene3D - 9 345 - -
Aip03g03522 354 Pfam Zinc-binding dehydrogenase 186 309 IPR013149 -
Aip03g03522 354 Pfam Alcohol dehydrogenase GroES-like domain 31 142 IPR013154 -
Aip03g03522 354 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 2-RELATED 4 351 - -
Aip03g03522 354 PANTHER ALDEHYDE REDUCTASE 4 351 - -
Aip03g03522 354 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 64 78 IPR002328 GO:0008270|GO:0016491
Aip03g03522 354 Gene3D - 159 315 - -
Aip03g03522 354 CDD CAD1 7 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03522 Aip-Chr3 115062910 115066445 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03522 4 349 Monolignol Biosynthesis Gene Families AT2G21890 72.701 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03522 K00083 - gmx:100819684 585.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03522 03 115062910 115066445 Aip03g03522 03 115062910 115066445 ECH