Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03518 ATGTTTCAGGTTCATAATGATGATGAGGCAGACGATCAAAGAGATGTCATCATTCTCGATGGAATAGGTTTGTTTGGTGCAATTGATTTTGATGCGTTGCGAGCTGAGGAGATTATGATGATAGAGTTTGTACATTTGAAAACTACTTATGACTTCTATAACGAGTTCGGTCGAATTAAGGGGTTTTCCATAAGGCGGTCGAAGGTAGGGCGCTGCAAGAAGGCAGGATCTGAAGGAGACATTATATGGCAAATTTTTGTGTGCTCGCGACAAGGTGAACGAGATGCAAAGCATGTTCATAGAAATGGTAGGAAGATGGATCCTAGACCAGTAACGCGATGCGGGTGTAATGCGCGGATAAAAGTTTATGTTGACTCGAGGAACGGACGATGGTACGTTGAGTTCTTCTCCGATGAACATAACCAAGACATGTTGGAGGCAAGGTTTAGGGGAATGATGCGGTCTCACCGGGCAATAAAAATGGGGGATTTACACCAGATTAATACGATGAGAAGCTCTGGCCTTCAAGTTCCGACAATATTTTGA 546 0.4341 MFQVHNDDEADDQRDVIILDGIGLFGAIDFDALRAEEIMMIEFVHLKTTYDFYNEFGRIKGFSIRRSKVGRCKKAGSEGDIIWQIFVCSRQGERDAKHVHRNGRKMDPRPVTRCGCNARIKVYVDSRNGRWYVEFFSDEHNQDMLEARFRGMMRSHRAIKMGDLHQINTMRSSGLQVPTIF 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03518 181 Pfam FAR1 DNA-binding domain 51 144 IPR004330 -
Aip03g03518 181 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 34 157 - -
Aip03g03518 181 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 34 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03518 Aip-Chr3 114931382 114934068 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip03g03518 FAR1 4.7e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03518 - - ahf:112772626 327.405