Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03515 ATGGCTGAGTTGGATGCAAGAAGAGCAGAGGTTCTTGGAAATGCAGCTAGAGTCCTTCAGAGGCAAATACGTACACATATTGCACGCAAGGAATTTAAAGAGTTGCGTCAAGCTGCAGTCTGTTTGCAATGTAATTTGAGAGGAATATTGGCCCGGAAGCTCTATGAGCAGTTGCGTCGTAAAGCAGCAGCTCTGAAAATAGAAAAGAACTTCAAAGGATACATTGCTAGGAAATCTTTCTTAAGTGTACGATCGTCTGCTATAATAATACAGATAGGTTTAAGGGCTATGAAGGCTCGTGATGAATTTAGATTTAGAAAGCAAACAAAGGCTGCAATTCATATCCAGTGTGGTTGGAGGAGAAGGGTTGCTAGGAAGGAACTTAGAATGCTCAAAATGGCTGCAAGAGAAACAGGGGCCCTTAAGAAAGCAAAGGACAAACTAGAGAAGCGTGTAGAAGAACTTCCATGGCGGGTAGGGTTCAGGTTGGGGTTTGATCCATCGGCGCCTCAGAACAGTGCAGGAGTTGCTGAGCCTCCAGGACAACCAGAAAACAATCAAGACAGAGTAGCCAACCCCGTGCAGATTCCTGGGCAAGCTGACATTCAACAAGCAGAAGGCGGTCCAAACCCCAGTTCCATGAATTCATTCAGTTCTATGTTATTATGGATCTTAGGAGGTGCTTCATCTGAGGGTCTCAACTCGTTTTTTTCAATGTTCAGAGATGTTAGAGACCAAGGACAAGTTTTTGTCGAAACTCCTCACGATGAAAACCGTGAGAATAAGGATAATGACAGATAG 801 0.4407 MAELDARRAEVLGNAARVLQRQIRTHIARKEFKELRQAAVCLQCNLRGILARKLYEQLRRKAAALKIEKNFKGYIARKSFLSVRSSAIIIQIGLRAMKARDEFRFRKQTKAAIHIQCGWRRRVARKELRMLKMAARETGALKKAKDKLEKRVEELPWRVGFRLGFDPSAPQNSAGVAEPPGQPENNQDRVANPVQIPGQADIQQAEGGPNPSSMNSFSSMLLWILGGASSEGLNSFFSMFRDVRDQGQVFVETPHDENRENKDNDR 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03515 266 ProSiteProfiles IQ motif profile. 14 38 IPR000048 GO:0005515
Aip03g03515 266 PANTHER MYOSIN-17 1 178 - -
Aip03g03515 266 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 137 IPR027417 -
Aip03g03515 266 Coils Coil 131 151 - -
Aip03g03515 266 PANTHER MYOSIN 1 178 - -
Aip03g03515 266 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 62 IPR027417 -
Aip03g03515 266 Gene3D - 11 61 - -
Aip03g03515 266 Gene3D - 62 112 - -
Aip03g03515 266 ProSiteProfiles IQ motif profile. 35 64 IPR000048 GO:0005515
Aip03g03515 266 ProSiteProfiles IQ motif profile. 84 112 IPR000048 GO:0005515
Aip03g03515 266 ProSiteProfiles IQ motif profile. 108 137 IPR000048 GO:0005515
Aip03g03515 266 Pfam IQ calmodulin-binding motif 14 33 IPR000048 GO:0005515
Aip03g03515 266 Pfam IQ calmodulin-binding motif 36 55 IPR000048 GO:0005515
Aip03g03515 266 Pfam IQ calmodulin-binding motif 109 129 IPR000048 GO:0005515
Aip03g03515 266 ProSiteProfiles IQ motif profile. 60 86 IPR000048 GO:0005515
Aip03g03515 266 SMART iq_5 34 56 IPR000048 GO:0005515
Aip03g03515 266 SMART iq_5 59 81 IPR000048 GO:0005515
Aip03g03515 266 SMART iq_5 82 104 IPR000048 GO:0005515
Aip03g03515 266 SMART iq_5 11 33 IPR000048 GO:0005515
Aip03g03515 266 SMART iq_5 107 129 IPR000048 GO:0005515
Aip03g03515 266 MobiDBLite consensus disorder prediction 168 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03515 Aip-Chr3 114879476 114881065 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03515 1 159 Myosins gene family AT5G20490 61.538 9.31e-61 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03515 K10357 - gmx:100777802 259.61