Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03513 ATGATGATGAAAGAAAGCAATAATAATAAGAAGGCGTACATGGCAGTGATCCTGATACAAGCCATATACGCAGTCATGTTCCTTCTCTCCAAGGCAGCATTCGACCATGGCATCAACACCTTCATCTTCGTCTTTTATAGGCAGGCCCTGGCCACTGTTTTCCTCGCTCCTTTTGCTTTCTTCTTCGAACGCAAAACTGCACCACCTCTCTCATTTCTCACCCTCTGCAACATCTTCTTCCTTTCTCTCTTCGGGATCACGGGGAGCTTGGACGTATATGGTATTGCACTTATATACACTTCACCCACTTTGGCTTCTGCTACCACTAACTGCCTTCCAGCCATTACCTTCTTCTTGGCACTCTTACTCAGGATTGAAATTCTGAAAGTAAAGACAGCGGCGGGTGTGGCTAAAATGGTAGGTGTGGTGGCATGCTTGTGTGGAGCCGCAACACTTGCTTTCTACAAAGGTCCTCATTTTCAGCTTTTAGGGCACCATCAAATACAACCATCTTCTTCTTCTCCTCCTTCTTCTTCTTCTTGGGTAAAGGGTTGCTTCCTCATGCTCCTCTCTAACTTCCTTTTTGGGATTTGGCTTGTGCTACAGGGTTTTGTGGTGAAAGGATACCCTTCAAAGCTGCGTCTTACGACTCTTCAGTGTTTGTGTAGCTCAATTCAGTCTTTCTGCATTGCATATGGCGTAGAGAGAAGCATTGAGCAATGGAAGCTGAGTTGGAATGTCTCACTCATTGCCGTACTATACTGTGGAATAATGGTGACGGGTGTGACGTATTACATACAAACATGGGTGATAGAGAAGAAAGGGCCAGTGTTTCTGGCCATGTCAACGCCACTCGCTTTCATAATCACCGTCGTCTCCTCCGCAATTCTGCTGCACCAGATCGTAACTTTGGGAAGGTGA 921 0.4604 MMMKESNNNKKAYMAVILIQAIYAVMFLLSKAAFDHGINTFIFVFYRQALATVFLAPFAFFFERKTAPPLSFLTLCNIFFLSLFGITGSLDVYGIALIYTSPTLASATTNCLPAITFFLALLLRIEILKVKTAAGVAKMVGVVACLCGAATLAFYKGPHFQLLGHHQIQPSSSSPPSSSSWVKGCFLMLLSNFLFGIWLVLQGFVVKGYPSKLRLTTLQCLCSSIQSFCIAYGVERSIEQWKLSWNVSLIAVLYCGIMVTGVTYYIQTWVIEKKGPVFLAMSTPLAFIITVVSSAILLHQIVTLGR 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03513 306 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 155 - -
Aip03g03513 306 PANTHER WAT1-RELATED PROTEIN 12 305 - -
Aip03g03513 306 Pfam EamA-like transporter family 11 143 IPR000620 GO:0016020|GO:0016021
Aip03g03513 306 Pfam EamA-like transporter family 183 304 IPR000620 GO:0016020|GO:0016021
Aip03g03513 306 PANTHER WAT1-RELATED PROTEIN 12 305 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03513 Aip-Chr3 114868776 114871223 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03513 8 255 Nodulin-like Gene Family AT5G64700 60.311 4.71e-96 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03513 - - ccaj:109799350 447.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03513 03 114868776 114871223 Aip03g03513 03 114868776 114871223 ECH
Aip03g03513 03 114868776 114871223 Aip10g02305 10 103218650 103222813 ECH
Aip03g03513 03 114868776 114871223 Aip10g02306 10 103301857 103305813 PCT