Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03507 ATGGATGTTGATTCGAAACCACTCAATTCACAAGACAATGTTGAAGATTGCTTGATGACTGGTATGGAAGAGAATGTAAACTGCACTTGTGATTGTGGTGGCAGCAGTAGCAAGTGTGTTGTTGTGACGGCCGATAATATTATAAACCAGACATTTGAAACATCGGATGCGGCTTATAACTTGTATGTGCGTTATGCAAGGTGTGTTGGGTTCGGAGTTCGTAAGGGTGATACAGCGCGTGGAAAAGATGGAACACAACACAGAAGGCCATTTTTTTGCAACAAGGAAGGAAAGAGAGCTGAGAAATACATCTGTAATTCGAAAAGGAAAAGGGAGCATAAAGCGCTGACTCGTACGGGTTATGAAGCCATGCTTGCGGTGTACTTTGACACCAAAACTTTAGCTTGGAGAGTTAAAAAATTAGTTGAGAAGCACAACCACGATCTTGTCCCCCAATGTTTGGTACACCTAATTCCAAACCACCGCGGGATGACTGAGGCTCAAAAAGCTCAGGTGAACATCATGCACGATAATGGTCCACCAACCTCTAAAATAATGGGACTAATGGTAGGCCAAGTCGGGGGTTATGCTAATGTTGGGTTCACAAAGAAGGATCTGGATAACCACATTGAAAGAACTCATCGTGCAAAGCTCATTGGTGGGGATCCTAATGCAACAATTAGCTATCTACTTGGAAAGCTGATGTTGACCCCATGGCCATGGGTGGATTATCAGTGCTTTGGAGATGTGCTTGCATTTGATACAACCTATCAGAAGAATAAGTACAGAAGACCATTGGTAATCTTCTCGGGTTGTAACCATCACCGTCAAACATGCATATTTGGCTTTGCCTTGATAGAGAACGAACAAACGAAAACATATATGTGGTTGTTGCAAAACTTTCTAGATGTCATGCTGAACAAGTCTCCTAGTGTTGTGGTCACAGACGGTGATGAGGCAATGAAGGCAGTAATTCAAGAAATTTTCCCAAATGCAACTCACCGATTATGTGGTTGGCACATTCAGAAAAATGTAACGGCAAACATAAAAAGCAAAGGTTTTTCCGACGACTTCAGAAGATGTTTGTATGCTCCATGGCATCCGGATGAATTTGAAGAATATTGGGAGAATATGATAAAAAAAATATGGGTTGGAGGAAAATGA 1164 0.4184 MDVDSKPLNSQDNVEDCLMTGMEENVNCTCDCGGSSSKCVVVTADNIINQTFETSDAAYNLYVRYARCVGFGVRKGDTARGKDGTQHRRPFFCNKEGKRAEKYICNSKRKREHKALTRTGYEAMLAVYFDTKTLAWRVKKLVEKHNHDLVPQCLVHLIPNHRGMTEAQKAQVNIMHDNGPPTSKIMGLMVGQVGGYANVGFTKKDLDNHIERTHRAKLIGGDPNATISYLLGKLMLTPWPWVDYQCFGDVLAFDTTYQKNKYRRPLVIFSGCNHHRQTCIFGFALIENEQTKTYMWLLQNFLDVMLNKSPSVVVTDGDEAMKAVIQEIFPNATHRLCGWHIQKNVTANIKSKGFSDDFRRCLYAPWHPDEFEEYWENMIKKIWVGGK 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03507 387 Pfam MULE transposase domain 250 344 IPR018289 -
Aip03g03507 387 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 242 381 IPR031052 GO:0006355
Aip03g03507 387 Pfam FAR1 DNA-binding domain 61 151 IPR004330 -
Aip03g03507 387 PANTHER OS02G0262500 PROTEIN 46 230 - -
Aip03g03507 387 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 46 230 IPR031052 GO:0006355
Aip03g03507 387 PANTHER OS02G0262500 PROTEIN 242 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03507 Aip-Chr3 114829599 114830827 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip03g03507 MULE 2.4e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03507 - - aip:107633598 762.296