Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03499 ATGAGTTTAACGGGTACAGAAAGCTCAGAAGATGGTGCAGGGCATCCGGAACCTCCCGATCCTGATGTTCTTGAAGTTGACCCTACCTGTCGCTATATTAGGTATAAAGAAGTCATCGGCAAAGGAGCTTTCAAAACTGTTTACAAGGCTTTTGACGAAGTCAATGGAATTGAAGTTGCATGGAGCCAGGTTCAAATTGATGATGTGCTACAGTCACCAGGTGACTTAGAGAGGTTGTACTCAGAAGTGCATCTCCTGAGATCACTGGAACACGATAACATAGTAAGATTCTACAATTCATGGATTGATGAGAAGCACAAAACTGTTAACATGATTACCGAGTTGTTTACATCGGGCAGCCTCAAACAGTATCGGAAAAAACACAAGAAGGTTGACATAAAGGCTATTAAGGGATGGGCAAAACAGATATTAACAGGCTTAAGCTACCTCCACAGTCACAACCCACCAATCATACATAGGGACCTGAAGTGTGATAATATATTTATCAATGGTCATCAGGGAGAAGTTAAAATTGGAGATTTGGGGCTGGCAACTTTCTTGGAGCGAACCAATGCCAAGAGTGTTATTGGAACCCCGGAGTTTATGGCACCAGAGTTGTATGATGAAAATTACAATGAATTAGCGGATATATATTCATTTGGTATGTGCATGCTTGAGTTGGTGACTTCTGAATATCCTTATAGTGAATGCAGAAACTCAGCTCAGATATACAAGAAGGTTTCATCTGGTATAAAACCTGTTGCACTTTCTAAAGTCAAAGATCCAGAGGTAAAATCCTTCATTGAAAAATGTCTTGTCCCAGCATCTGAAAGATTGTCTGCAAGGGAGCTTCTGATGCATTCCATTCTTGACTTGAATGGTTCGACAAGGATTCATCCTTTTCCATTACCAGATATTGTTCTTCCCAAATTTGGAGCCTTTGAAGGCCGATGCTTGATGTCAGAAGGTCCTACTAGTGCACGTCATGGAAATATTTCTATGGATCTTGGTGGCATGAGTGAACTACCTGTGATCACCGTATTTGATAACTCTACAGATGACGCATCATCATCTCATTCTCCATCTGTTGAGATAAGAATGCCAAAGGGAGGTGACATATTCTTTCTCAAAGGCCAGGAAAATGATGACAATTCTGTATCATTAGTTCTCCGGATAGCTGATCAGAGTGGAAGGGCAAGAAATATCCATTTTATATTCTACCTTGACACTGATACTGCTGTCTCCGTTTCAAGTGAAATGGTTGAGCAACTTGAGCTTGCTGAACAGAATGTCCTCTTCATAGCTGAGTTAATAGATTTGTTACTGCTGAAGTTGGTTCCTGACTGGAAACCTTGTGTTTCAATTGACCATTTGGTTTCTCCAAATGGTAAATATCATGTGACCCAACGTAGAGCCTTGGAGTCGGCCAAATACCAAGAAATCCCAAAACTTTCCAGCCAAATTGTGCCTCAAGAGTTAGGTGCCTTAACCTCAGCTGGAAGATCAGCTGCAGAAGAGAACCATGATAATATGGATTTTGATGAGGTTGTATCTCAAGAGAGCATTGGTATGCAAAGAGCAACTAAGACAGATGATTTGTGTTCTGAGGTGTCGTATGCTTCAGCAACATCAGAACTCAACGATAATAAGCTTTCTGTGGCTTCATTTATGTCTTCTGCTGAATCAGGACTAGCAGACTTAAACATAACTATACCGAATGGAGGGAGTCAATCCTCATTTGTAACTGAAATTGGGGGATCTCCTGATTACAGGATCAAGTTTTCAGAATTGGGAAGTGATGATACGACGAGCTTCTCTACTCATCCTTCCTCCCTGCTTGAACGCGAGGATGAATTCAGAACAGAGCTAGAAATGATTGAACAGAAGTATCACGAGGTAATTAGATTTTTCCAGAAGAAGATACCAGGCCATCATGGAGATTAG 1944 0.411 MSLTGTESSEDGAGHPEPPDPDVLEVDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGIEVAWSQVQIDDVLQSPGDLERLYSEVHLLRSLEHDNIVRFYNSWIDEKHKTVNMITELFTSGSLKQYRKKHKKVDIKAIKGWAKQILTGLSYLHSHNPPIIHRDLKCDNIFINGHQGEVKIGDLGLATFLERTNAKSVIGTPEFMAPELYDENYNELADIYSFGMCMLELVTSEYPYSECRNSAQIYKKVSSGIKPVALSKVKDPEVKSFIEKCLVPASERLSARELLMHSILDLNGSTRIHPFPLPDIVLPKFGAFEGRCLMSEGPTSARHGNISMDLGGMSELPVITVFDNSTDDASSSHSPSVEIRMPKGGDIFFLKGQENDDNSVSLVLRIADQSGRARNIHFIFYLDTDTAVSVSSEMVEQLELAEQNVLFIAELIDLLLLKLVPDWKPCVSIDHLVSPNGKYHVTQRRALESAKYQEIPKLSSQIVPQELGALTSAGRSAAEENHDNMDFDEVVSQESIGMQRATKTDDLCSEVSYASATSELNDNKLSVASFMSSAESGLADLNITIPNGGSQSSFVTEIGGSPDYRIKFSELGSDDTTSFSTHPSSLLEREDEFRTELEMIEQKYHEVIRFFQKKIPGHHGD 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03499 647 Gene3D Transferase(Phosphotransferase) domain 1 116 295 - -
Aip03g03499 647 CDD STKc_WNK 31 290 - -
Aip03g03499 647 MobiDBLite consensus disorder prediction 1 25 - -
Aip03g03499 647 SMART serkin_6 33 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g03499 647 Pfam Protein kinase domain 35 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g03499 647 Gene3D Phosphorylase Kinase; domain 1 19 114 - -
Aip03g03499 647 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 5 640 - -
Aip03g03499 647 ProSiteProfiles Protein kinase domain profile. 33 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g03499 647 Gene3D - 384 451 - -
Aip03g03499 647 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK6-RELATED 5 640 - -
Aip03g03499 647 SUPERFAMILY Protein kinase-like (PK-like) 35 338 IPR011009 -
Aip03g03499 647 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03499 Aip-Chr3 114721974 114725761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03499 133 461 MAP Kinase Kinase Kinase AT1G49160 68.085 3.07e-165 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Aip03g03499 Pkinase 6.5e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03499 K08867 - gmx:121175054 819.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03499 03 114721974 114725761 Aip03g03499 03 114721974 114725761 ECH
Aip03g03499 03 114721974 114725761 Aip10g02324 10 104781725 104784453 PCT