Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03476 ATGTTGAGACTGCTACCTGGTGCAATTACGGATTCATGCAGAGTCAGATGCAGGGCCGGCACACTCTTCTGCATGACCCTTTCATGGAAGAAATCGTGGGCAGGTCTTCGGTGTTGGGCAACTACTCTGTTATTTTTGGTAATGATCTTAGCTGTTCAACGCATCTGTCTTCCCAGATTTGATTCTTCAATACTTCACTCCGGAAAATTCACAGTATCGCTACTAAAAGGGTCTCTCTGCTTTCATTCTGTCTTCGTCCAAAGTCTGTCTTCGTTTCCCACCACCATTCGTGAAACTGTTCCGTTGCTGTGGAAGGGAGCTGCTGATCAGGTGGCTATTGGAAAAAAAGATTATATGGAGAAAGGAAAATTAAGTCCAGGATTTCATTTCAATCCCACTGATGTAGAGCTTCTAAAGTATTTTCTGAAGAGGAAAGTGACCGGCAAAAAGCTACCCAATGTAATTGCTGAGATTAACGTTTATCAGTATTGTCCCTGGGACCTCCGAGGTAAGTCACATCTGAAAAGTGGGGATTTGGAGTGGTACTTCTTCTGTGCAAGAGGAAAAAAATATGGAATTGGGTCGAAGACGAACCGTGCTATAAAGAATGGGTACTGGAAAGCTACTGGTATGGACAAAGCTATTGTTCAGCATGATAAGCAAACTGTGGGGATGATGAAAATCCTTGTTTTCCACACTGGTAAAGCGCCTCATGGGACCCCAACCGATTGGGTTATGCATGAGTATAGGCTTCAAGATAAAGACCTTACTGACAAAGGAATTGCTCAGGACTCCTATGTTATCTGTAAGGTGTTCCGAAAGGAGGGTCATGGCCCACGGACACGGAGCGGTGCACAATATAGGAAACCATTTAATGAAGAAGATTGGGATGATGATGATCATCACGTTGTTGAGGAGGGGGGAACCCCTTCAACTGCTTTGGTTGCGCCGGTTTCCATTCAGTCTACGACATTCGATGGCTCTTCTTACATGAAGCCAACTTCTGTTTCATGTGAGTCGGGACCTGTGGCTACTTCTCCTGTCCCATCAACTCCTTCTTCAGATGCAAGCATTCACACGGTTAATAATGTTAATAATTCAACAGTGACTGATCTATCCAAAGACGAAAAAACAGTACCTGAGGAAAATATTGCTGCCGGTGACCTCTTGAGTAAGTTTTTTGAGGGTTTGGAAGACCTTGAGTCTGAATACACTCCAAATGGAGTGGGCTTGGATGACTTTTCCCCACATGGAATAAACTATGATGACTTGAGGCACTTGGACTTGATTGATCTCAATTTCCTATAG 1308 0.4396 MLRLLPGAITDSCRVRCRAGTLFCMTLSWKKSWAGLRCWATTLLFLVMILAVQRICLPRFDSSILHSGKFTVSLLKGSLCFHSVFVQSLSSFPTTIRETVPLLWKGAADQVAIGKKDYMEKGKLSPGFHFNPTDVELLKYFLKRKVTGKKLPNVIAEINVYQYCPWDLRGKSHLKSGDLEWYFFCARGKKYGIGSKTNRAIKNGYWKATGMDKAIVQHDKQTVGMMKILVFHTGKAPHGTPTDWVMHEYRLQDKDLTDKGIAQDSYVICKVFRKEGHGPRTRSGAQYRKPFNEEDWDDDDHHVVEEGGTPSTALVAPVSIQSTTFDGSSYMKPTSVSCESGPVATSPVPSTPSSDASIHTVNNVNNSTVTDLSKDEKTVPEENIAAGDLLSKFFEGLEDLESEYTPNGVGLDDFSPHGINYDDLRHLDLIDLNFL 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03476 435 ProSiteProfiles NAC domain profile. 124 274 IPR003441 GO:0003677|GO:0006355
Aip03g03476 435 PANTHER PLANT NAC DOMAIN PROTEIN 119 343 - -
Aip03g03476 435 Pfam No apical meristem (NAM) protein 126 251 IPR003441 GO:0003677|GO:0006355
Aip03g03476 435 PANTHER PLANT NAC DOMAIN PROTEIN 352 419 - -
Aip03g03476 435 SUPERFAMILY NAC domain 120 274 IPR036093 GO:0003677|GO:0006355
Aip03g03476 435 Gene3D NAC domain 133 277 IPR036093 GO:0003677|GO:0006355
Aip03g03476 435 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 352 419 - -
Aip03g03476 435 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 119 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03476 Aip-Chr3 113536611 113543934 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03476 119 377 NAC Transcription Factor Family AT5G09330 41.844 1.88e-66 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aip03g03476 NAM 3e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03476 - - adu:107480257 565.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03476 03 113536611 113543934 Aip03g03476 03 113536611 113543934 ECH
Aip03g03476 03 113536611 113543934 Aip10g02357 10 106825867 106827897 PCT