Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03469 ATGCTGATGCGAGATGCACCCCTTGTTATTGTATCACAGAGGCCTAATATAATGGATCTTGTGAGATGTGATGGAGCAGCACTCTTGTATAGAGACAAGGTATGGAGATTAGGTGTGGCTCCAAGTGAATCTCACATAAGAGAGTTAGCTTTATGGCCCTCTAAGTGCCATAAGGACTCCACAGGTTTGAGTACAGATAGCTTGTCTAATGCAGGCTTCTTAGGAGCTGCTGCTCTTGGTGACATTGTTTGTGGAATGGCAGTTGTGAGAATTTCTTCCATGGTCGTAGTTTTCTGGTTTAGATCACACACTGCTGCAGAAATCAGATGGGGTGGTGCAAAGTATGAACCTGGTGAAAGCGATGATCCTACAAAGATGAGTCCAAGATCATCATACAAGGCTTTCCTTGAAGTTGTGAAGGGAAGGAGCTTACCATGGAAGGACTATGAATAA 453 0.4393 MLMRDAPLVIVSQRPNIMDLVRCDGAALLYRDKVWRLGVAPSESHIRELALWPSKCHKDSTGLSTDSLSNAGFLGAAALGDIVCGMAVVRISSMVVVFWFRSHTAAEIRWGGAKYEPGESDDPTKMSPRSSYKAFLEVVKGRSLPWKDYE 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03469 150 Pfam Phytochrome region 5 150 IPR013515 GO:0006355|GO:0009584
Aip03g03469 150 Gene3D - 2 150 IPR043150 -
Aip03g03469 150 PRINTS Phytochrome signature 10 30 IPR001294 GO:0006355|GO:0009584
Aip03g03469 150 PRINTS Phytochrome signature 95 114 IPR001294 GO:0006355|GO:0009584
Aip03g03469 150 PRINTS Phytochrome signature 128 146 IPR001294 GO:0006355|GO:0009584
Aip03g03469 150 PANTHER PHYTOCHROME 1 150 - -
Aip03g03469 150 PANTHER TWO-COMPONENT HISTIDINE KINASE 1 150 - -
Aip03g03469 150 SUPERFAMILY GAF domain-like 1 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03469 Aip-Chr3 113405492 113405944 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03469 1 150 Histidine Kinase Gene Family AT1G09570 71.333 2.93e-68 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03469 K12120 - cpap:110815306 237.654